RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CHRNA4P43681 627 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 GPR1P46091 355 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 STC1P52823 247 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 LIMK1P53667 647 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 PFN3P60673 137 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 BNC1Q01954 994 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 SLC14A1Q13336 389 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 SPARCL1Q14515 664 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 PRAMEF14Q5SWL7 426 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 FAXCQ5TGI0 409 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.15
RAB40C-208ENST00000564703 SYT10Q6XYQ8 523 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 LYSMD3Q7Z3D4 306 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 TMC3Q7Z5M5 1100 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 TECPR1Q7Z6L1 1165 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 NLRP8Q86W28 1048 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 BLOC1S5Q8TDH9 187 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 APOL2Q9BQE5 337 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 CDH19Q9H159 772 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 FAM83DQ9H4H8 585 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 TM7SF3Q9NS93 570 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 DNAAF2Q9NVR5 837 aaKnown RBP15.96■□□□□ 0.15
RAB40C-208ENST00000564703 CD84Q9UIB8 345 aa15.96■□□□□ 0.15
RAB40C-208ENST00000564703 SPTY2D1-AS1A0A0U1RR47 76 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 C2orf81A6NN90 581 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 YKT6O15498 198 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 TUBB4AP04350 444 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ATXN1LP0C7T5 689 aaKnown RBP15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ZSCAN5DPP0CG00 497 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 KELP23276 732 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ADRA1AP35348 466 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 SPINT3P49223 89 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 CCT8P50990 548 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 DPTQ07507 201 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 CDKN3Q16667 212 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 RSPO4Q2I0M5 234 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF423Q2M1K9 1284 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 RAET1GQ6H3X3 334 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ESRP1Q6NXG1 681 aaKnown RBP15.95■□□□□ 0.14
RAB40C-208ENST00000564703 PPP1R21Q6ZMI0 780 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF765Q7L2R6 523 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 GLT6D1Q7Z4J2 308 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
RAB40C-208ENST00000564703 OR2I1PQ8NGU4 316 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 ABCG8Q9H221 673 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 PHPT1Q9NRX4 125 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-208ENST00000564703 SMARCAL1Q9NZC9 954 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 PKP3Q9Y446 797 aa15.95■□□□□ 0.14
RAB40C-208ENST00000564703 A0A1B0GTQ1 180 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 PHF2O75151 1096 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 USP12O75317 370 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 CRTAMO95727 393 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 AP2A1O95782 977 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 KRT14P02533 472 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 C1SP09871 688 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF883P0CG24 379 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 GM2AP17900 193 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 HMGCLP35914 325 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 TRIM23P36406 574 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 FNTAP49354 379 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 BASP1P80723 227 aaKnown RBP15.94■□□□□ 0.14
RAB40C-208ENST00000564703 PDE1BQ01064 536 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 CYP1B1Q16678 543 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 ZDHHC20Q5W0Z9 365 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 KCTD11Q693B1 232 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 ENPP7Q6UWV6 458 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 PRUNE1Q86TP1 453 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 CREG2Q8IUH2 290 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 DNAAF3Q8N9W5 541 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 PLA2G15Q8NCC3 412 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 BRSK1Q8TDC3 778 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 SCAMP4Q969E2 229 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 GORASP1Q9BQQ3 440 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 RIOK2Q9BVS4 552 aaKnown RBP15.94■□□□□ 0.14
RAB40C-208ENST00000564703 WDR26Q9H7D7 661 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 IL21RQ9HBE5 538 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 ARNT2Q9HBZ2 717 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 DNAJC28Q9NX36 388 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.94■□□□□ 0.14
RAB40C-208ENST00000564703 OR1A2Q9Y585 309 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 GVINP1Q7Z2Y8 2422 aa15.94■□□□□ 0.14
RAB40C-208ENST00000564703 H3BM21 787 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 SLC30A4O14863 429 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 STX7O15400 261 aaKnown RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 APRTP07741 180 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 HOXC4P09017 264 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 RXRGP48443 463 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 BLKP51451 505 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 HNRNPKP61978 463 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 PPARDQ03181 441 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 NFATC4Q14934 902 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 PPP1R7Q15435 360 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 TAF1AQ15573 450 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 TRIP13Q15645 432 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 RFLNAQ6ZTI6 216 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 PARGQ86W56 976 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 KLHDC8BQ8IXV7 354 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 BTN2A2Q8WVV5 523 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 C16orf45Q96MC5 204 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 RUNDC3BQ96NL0 473 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms