RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IDI1Q13907 227 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 TRIM14Q14142 442 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 SOWAHAQ2M3V2 549 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 ESCO2Q56NI9 601 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 ANKRD45Q5TZF3 282 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 NKAPQ8N5F7 415 aaKnown RBP4.28□□□□□ -1.72
CHD9-212ENST00000564641 PARP16Q8N5Y8 322 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 GJC3Q8NFK1 279 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 TMEM19Q96HH6 336 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 SMYD2Q9NRG4 433 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 CDC14AQ9UNH5 594 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 NFE2L3Q9Y4A8 694 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 ADGRL2O95490 1459 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 TET3O43151 1660 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 ABCC5O15440 1437 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 DCCP43146 1447 aa4.28□□□□□ -1.72
CHD9-212ENST00000564641 GCC2Q8IWJ2 1684 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 A0A0U1RQF3 1178 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 KLRF2D3W0D1 207 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 CEP104O60308 925 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 CD72P21854 359 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 PAX3P23760 479 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 PIGAP37287 484 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 RAD23BP54727 409 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 ITGADQ13349 1161 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 RALBP1Q15311 655 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 METTL27Q8N6F8 245 aaPredicted RBP4.27□□□□□ -1.73
CHD9-212ENST00000564641 WDSUB1Q8N9V3 476 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 LRRC8CQ8TDW0 803 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 NOC3LQ8WTT2 800 aaKnown RBP4.27□□□□□ -1.73
CHD9-212ENST00000564641 ZC3HAV1LQ96H79 300 aaKnown RBP4.27□□□□□ -1.73
CHD9-212ENST00000564641 FAM167BQ9BTA0 163 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 STN1Q9H668 368 aaKnown RBP4.27□□□□□ -1.73
CHD9-212ENST00000564641 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 PCDH9Q9HC56 1237 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 ZNF334Q9HCZ1 680 aaPredicted RBP4.27□□□□□ -1.73
CHD9-212ENST00000564641 ZNF69Q9UC07 566 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 GAB2Q9UQC2 676 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 MROH1Q8NDA8 1641 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 NOS1P29475 1434 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 NWD1Q149M9 1564 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 ROCK1Q13464 1354 aa4.27□□□□□ -1.73
CHD9-212ENST00000564641 PHLPP1O60346 1717 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 TRPM2O94759 1503 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 ROBO1Q9Y6N7 1651 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 SH2D7A6NKC9 451 aaPredicted RBP4.26□□□□□ -1.73
CHD9-212ENST00000564641 HMGB1P1B2RPK0 211 aaPredicted RBP4.26□□□□□ -1.73
CHD9-212ENST00000564641 AKR1B15C9JRZ8 316 aaPredicted RBP4.26□□□□□ -1.73
CHD9-212ENST00000564641 MID1O15344 667 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 TSPAN3O60637 253 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 PAK4O96013 591 aaPredicted RBP4.26□□□□□ -1.73
CHD9-212ENST00000564641 SLC2A4P14672 509 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 TRAPPC10P48553 1259 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 EFR3AQ14156 821 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 EFNB3Q15768 340 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 HIST2H2BCQ6DN03 193 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 PLEKHA7Q6IQ23 1121 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 C19orf48Q6RUI8 117 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 MOGAT3Q86VF5 341 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 IL17RCQ8NAC3 791 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 SCCPDHQ8NBX0 429 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 MYRIPQ8NFW9 859 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 CEP70Q8NHQ1 597 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 LRRC59Q96AG4 307 aaKnown RBP4.26□□□□□ -1.73
CHD9-212ENST00000564641 TTC14Q96N46 770 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 CSF3RQ99062 836 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 LMAN2LQ9H0V9 348 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 PPCSQ9HAB8 311 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 C17orf75Q9HAS0 396 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 ZFP57Q9NU63 452 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 MCM9Q9NXL9 1143 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 ALKBH4Q9NXW9 302 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 PGAP2Q9UHJ9 254 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 A3GALT2U3KPV4 340 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 RIMS2Q9UQ26 1411 aa4.26□□□□□ -1.73
CHD9-212ENST00000564641 CHD2O14647 1828 aaKnown RBP4.25□□□□□ -1.73
CHD9-212ENST00000564641 STRCP1A6NGW2 1772 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 HSPB2A8KAH6 182 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 ZNF587BE7ETH6 402 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 C16orf97H3BN30 126 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 EDIL3O43854 480 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 SH3BP5O60239 455 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 NDUFS7O75251 213 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 RXRAP19793 462 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 HALP42357 657 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 PAPOLAP51003 745 aaKnown RBP4.25□□□□□ -1.73
CHD9-212ENST00000564641 POSTNQ15063 836 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 HSPB2Q16082 182 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 ANO1Q5XXA6 986 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 CCDC174Q6PII3 467 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 C17orf99Q6UX52 265 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 MARK2Q7KZI7 788 aaKnown RBP4.25□□□□□ -1.73
CHD9-212ENST00000564641 SMAP1Q8IYB5 467 aaPredicted RBP4.25□□□□□ -1.73
CHD9-212ENST00000564641 ANKRD42Q8N9B4 389 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms