RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZNF235Q14590 738 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 LBRQ14739 615 aaKnown RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 CLCA4Q14CN2 919 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 PPP6R3Q5H9R7 873 aaPredicted RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 PLEKHA7Q6IQ23 1121 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 SLC30A9Q6PML9 568 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 PSTKQ8IV42 348 aaKnown RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 LZTR1Q8N653 840 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ARFGAP1Q8N6T3 406 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 CCDC112Q8NEF3 446 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 OR4D9Q8NGE8 314 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 JPH3Q8WXH2 748 aaPredicted RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 NKD1Q969G9 470 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 PMEPA1Q969W9 287 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ERGIC2Q96RQ1 377 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 DDA1Q9BW61 102 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 SLC12A9Q9BXP2 914 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ADNPQ9H2P0 1102 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 TAS2R14Q9NYV8 317 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.16
CDR2-204ENST00000564542 PCSK1NQ9UHG2 260 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 SLC17A4Q9Y2C5 497 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 FLNCQ14315 2725 aa14.08□□□□□ -0.16
CDR2-204ENST00000564542 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
CDR2-204ENST00000564542 PRPSAP2O60256 369 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 IVLP07476 585 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 THRAP10827 490 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CR2P20023 1033 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 LHCGRP22888 699 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CSF2RBP32927 897 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CTBSQ01459 385 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 DPYSQ14117 519 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 DENND2CQ68D51 928 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 RAET1GQ6H3X3 334 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 BORAQ6PGQ7 559 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CYP4V2Q6ZWL3 525 aaPredicted RBP14.07□□□□□ -0.16
CDR2-204ENST00000564542 HSD11B1LQ7Z5J1 315 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 TP53INP2Q8IXH6 220 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 NAGSQ8N159 534 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CBARPQ8N350 705 aaPredicted RBP14.07□□□□□ -0.16
CDR2-204ENST00000564542 AGBL5Q8NDL9 886 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 FNIP1Q8TF40 1166 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
CDR2-204ENST00000564542 PTCD2Q8WV60 388 aaKnown RBP14.07□□□□□ -0.16
CDR2-204ENST00000564542 PATE1Q8WXA2 126 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 NUDCD1Q96RS6 583 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 SYT11Q9BT88 431 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 CDH19Q9H159 772 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 PCDHGC4Q9Y5F7 938 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 ST14Q9Y5Y6 855 aa14.07□□□□□ -0.16
CDR2-204ENST00000564542 IGHV1OR21-1A0A087WYE8 117 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 TTC24A2A3L6 582 aaPredicted RBP14.06□□□□□ -0.16
CDR2-204ENST00000564542 GOLGA6CA6NDK9 693 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 GOLGA6BA6NDN3 693 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 NPIPB15A6NHN6 443 aaPredicted RBP14.06□□□□□ -0.16
CDR2-204ENST00000564542 RNF8O76064 485 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 PEX11BO96011 259 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 GOLGA6DP0CG33 693 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 CYP2A6P11509 494 aaPredicted RBP14.06□□□□□ -0.16
CDR2-204ENST00000564542 LIFP15018 202 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 MIPP30301 263 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 UGT1A3P35503 534 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 ADCY8P40145 1251 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 DPTQ07507 201 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 SQSTM1Q13501 440 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 NKAIN2Q5VXU1 208 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 IL22RA1Q8N6P7 574 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 DPYSL5Q9BPU6 564 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 MGME1Q9BQP7 344 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 ASPSCR1Q9BZE9 553 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 ZWILCHQ9H900 591 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 NOD2Q9HC29 1040 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 GOLGA6AQ9NYA3 693 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 CWC15Q9P013 229 aaKnown RBP14.06□□□□□ -0.16
CDR2-204ENST00000564542 PHTF1Q9UMS5 762 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 B3GALT1Q9Y5Z6 326 aa14.06□□□□□ -0.16
CDR2-204ENST00000564542 TMEM191CA6NGB0 347 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 LRRC10BA6NIK2 292 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 TMCO5BA8MYB1 307 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 PPM1DO15297 605 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 LRCH4O75427 683 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 ATP1A3P13637 1013 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 TNFAIP3P21580 790 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 CSTF2P33240 577 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■□□□ 11.8
CDR2-204ENST00000564542 ACTR1BP42025 376 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 POLD2P49005 469 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 RAB15P59190 212 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 ACTR1AP61163 376 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 GPLD1P80108 840 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 MYL5Q02045 173 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 TLE1Q04724 770 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 TRAF2Q12933 501 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 RALGPS1Q5JS13 557 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
CDR2-204ENST00000564542 Q6ZVL8 140 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 USP45Q70EL2 814 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 IRF2BP2Q7Z5L9 587 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms