RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 C1orf210Q8IVY1 113 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 LMNTD2Q8IXW0 634 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.77■□□□□ 0.6
SPNS1-206ENST00000564476 OR4K2Q8NGD2 314 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 GSDMBQ8TAX9 411 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 CDKN2AIPNLQ96HQ2 116 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 SMIM14Q96QK8 99 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 PCED1AQ9H1Q7 454 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 SEMA4AQ9H3S1 761 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 LRRC4CQ9HCJ2 640 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 NINJ2Q9NZG7 142 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 FBXO4Q9UKT5 387 aa18.77■□□□□ 0.6
SPNS1-206ENST00000564476 TBC1D3DA0A087WVF3 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3IA0A087WXS9 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3EA0A087X179 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3KA0A087X1G2 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 ZCWPW2A0A1B0GU75 182 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3FA6NER0 549 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 A8MX80 341 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3LB9A6J9 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 WNT9AO14904 365 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 AXIN1O15169 862 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3HP0C7X1 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 H2AFXP16104 143 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 NMBRP28336 390 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 CD6P30203 668 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 NUDT1P36639 197 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 NUBP1P53384 320 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 DCDC1P59894 354 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 CRYMQ14894 314 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 PTPRRQ15256 657 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 LONRF1Q17RB8 773 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 USP39Q53GS9 565 aaKnown RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 LRRC73Q5JTD7 316 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 HP1BP3Q5SSJ5 553 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3GQ6DHY5 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3CQ6IPX1 549 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 ZNF765Q7L2R6 523 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TECPR1Q7Z6L1 1165 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TBC1D3Q8IZP1 549 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 DTWD2Q8NBA8 298 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 PRSS33Q8NF86 280 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 SCG3Q8WXD2 468 aaKnown RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 ZNF669Q96BR6 464 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 EID2BQ96D98 161 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 MFSD3Q96ES6 412 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 COQ10AQ96MF6 247 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 FUT8Q9BYC5 575 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 FAM126AQ9BYI3 521 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 WSB2Q9NYS7 404 aaPredicted RBP18.76■□□□□ 0.59
SPNS1-206ENST00000564476 MOCS1Q9NZB8 636 aa18.76■□□□□ 0.59
SPNS1-206ENST00000564476 TRPM6Q9BX84 2022 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 LZTS3O60299 673 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 MMP20O60882 483 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 TM7SF2O76062 418 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 ABHD2P08910 425 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 C1SP09871 688 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 PRAMEP78395 509 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 BEND6Q5SZJ8 279 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 PDPK2PQ6A1A2 396 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 SLC36A4Q6YBV0 504 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 TRIM69Q86WT6 500 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 HORMAD1Q86X24 394 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 CNPY4Q8N129 248 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 TMEM105Q8N8V8 129 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 OR13J1Q8NGT2 312 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 CALML6Q8TD86 181 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 CFAP36Q96G28 342 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 DNAJC1Q96KC8 554 aaKnown RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 ZNF778Q96MU6 729 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 FCRL3Q96P31 734 aaPredicted RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 C1QTNF7Q9BXJ2 289 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 C1QTNF2Q9BXJ5 285 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 FAM83DQ9H4H8 585 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 ITM2BQ9Y287 266 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 KCTD3Q9Y597 815 aa18.75■□□□□ 0.59
SPNS1-206ENST00000564476 ZNF106Q9H2Y7 1883 aaKnown RBP18.75■□□□□ 0.59
SPNS1-206ENST00000564476 RIPK2O43353 540 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 RNGTTO60942 597 aaKnown RBP18.74■□□□□ 0.59
SPNS1-206ENST00000564476 SEMA4FO95754 770 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 PYGLP06737 847 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 C6P13671 934 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 BPIP17213 487 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 SSTR1P30872 391 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 STX2P32856 288 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 ACSL1P33121 698 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 SPAM1P38567 509 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 ARCN1P48444 511 aaKnown RBP18.74■□□□□ 0.59
SPNS1-206ENST00000564476 GPX6P59796 221 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 NHLH1Q02575 133 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 SGCGQ13326 291 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 ACOX1Q15067 660 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 CES3Q6UWW8 571 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 HSD11B1LQ7Z5J1 315 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 OR13C4Q8NGS5 318 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 HDAC10Q969S8 669 aa18.74■□□□□ 0.59
SPNS1-206ENST00000564476 DTD2Q96FN9 168 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms