RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 RBM15Q96T37 977 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CCDC3Q9BQI4 270 aa12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CEP41Q9BYV8 373 aa12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TMEM168Q9H0V1 697 aa12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CARS2Q9HA77 564 aaKnown RBP12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 KCTD5Q9NXV2 234 aa12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PTPRQQ9UMZ3 2332 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 A0A0J9YYE9 177 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 C3orf70A6NLC5 250 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ZNF487B1APH4 448 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CASC3O15234 703 aaKnown RBP12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 FZD6O60353 706 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TRBC1P01850 177 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 MPOP05164 745 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 HOXC4P09017 264 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 COMTP21964 271 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CD86P42081 329 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SLC1A1P43005 524 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 GPR1P46091 355 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CDK3Q00526 305 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PPIDQ08752 370 aaKnown RBP12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ZBTB17Q13105 803 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 IHHQ14623 411 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ISXQ2M1V0 245 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 LRRC38Q5VT99 294 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 DOK6Q6PKX4 331 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 RBM44Q6ZP01 1051 aaKnown RBP12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 RFLNAQ6ZTI6 216 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ARRDC2Q8TBH0 407 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CCDC74AQ96AQ1 378 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 AP2M1Q96CW1 435 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 GOLPH3Q9H4A6 298 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 DPEP2Q9H4A9 486 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 B4DGG1 531 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TLX3O43711 291 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ZFXP17010 805 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ZNF30P17039 623 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CYLC1P35663 651 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 GNPDA1P46926 289 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 GABREP78334 506 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SPIDRQ14159 915 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 PDK1Q15118 436 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 LLGL1Q15334 1064 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SPA17Q15506 151 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 C3orf38Q5JPI3 329 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 KAZNQ674X7 775 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 MFSD7Q6UXD7 560 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 B4GALNT4Q76KP1 1039 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TECPR1Q7Z6L1 1165 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CBARPQ8N350 705 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 CCL4L1Q8NHW4 92 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 SCAMP4Q969E2 229 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 AGAP3Q96P47 875 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 TEX101Q9BY14 249 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 ABCG8Q9H221 673 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 DNPEPQ9ULA0 475 aa12.09□□□□□ -0.47
TRAPPC2L-207ENST00000564404 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.47
TRAPPC2L-207ENST00000564404 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 TCEA3O75764 348 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 CLDN7O95471 211 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 PRLP01236 227 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 CEACAM5P06731 702 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 MMP2P08253 660 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 ACTN2P35609 894 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 ABCG1P45844 678 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 POLD2P49005 469 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 RPL26P61254 145 aaKnown RBP12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 PTSQ03393 145 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 DPTQ07507 201 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 GALNT3Q14435 633 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 FOXR1Q6PIV2 292 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 LRRC69Q6ZNQ3 347 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 TRIM74Q86UV6 250 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 CCDC50Q8IVM0 306 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 CCDC170Q8IYT3 715 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 CNTD1Q8N815 330 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 WDR48Q8TAF3 677 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 FRMD8Q9BZ67 464 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
TRAPPC2L-207ENST00000564404 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms