RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 B4GALT6Q9UBX8 382 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
SPG7-209ENST00000564047 FAM169AQ9Y6X4 670 aa12.92□□□□□ -0.34
SPG7-209ENST00000564047 CKAP5Q14008 2032 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 C1orf232A0A0U1RR37 186 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ZCWPW2A0A1B0GU75 182 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 A0A1W2PP55 124 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 AP1G1O43747 822 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ALDH1A2O94788 518 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ABHD2P08910 425 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 PAMP19021 973 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 NDUFV2P19404 249 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 LHCGRP22888 699 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 NMBRP28336 390 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 SSTR1P30872 391 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 HSD17B3P37058 310 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 MMP12P39900 470 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ZNF140P52738 457 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 RALGDSQ12967 914 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ARHGEF7Q14155 803 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 CRYMQ14894 314 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 TMEM52BQ4KMG9 183 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 LRRC73Q5JTD7 316 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 AGBL4Q5VU57 503 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 LRRC66Q68CR7 880 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ESRP1Q6NXG1 681 aaKnown RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 KBTBD6Q86V97 674 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 CACUL1Q86Y37 369 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
SPG7-209ENST00000564047 TSTD1Q8NFU3 115 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 UBLCP1Q8WVY7 318 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 ZNF669Q96BR6 464 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 MFSD3Q96ES6 412 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ZNF778Q96MU6 729 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 FCRL3Q96P31 734 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 RUFY1Q96T51 708 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 OMDQ99983 421 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 SLC6A17Q9H1V8 727 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 VPS37BQ9H9H4 285 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 NLE1Q9NVX2 485 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
SPG7-209ENST00000564047 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 IL17CQ9P0M4 197 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 FZD4Q9ULV1 537 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 FADS3Q9Y5Q0 445 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
SPG7-209ENST00000564047 PSMD11O00231 422 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 PLK4O00444 970 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 STX7O15400 261 aaKnown RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 SPINT1O43278 529 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 RNASEH2AO75792 299 aaKnown RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 CLDN7O95471 211 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 ACSL3O95573 720 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 ACADMP11310 421 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 HADHAP40939 763 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 CNGA3Q16281 694 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 KIAA0930Q6ICG6 404 aaPredicted RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 KIAA1324Q6UXG2 1013 aaKnown RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 TSPAN33Q86UF1 283 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 CBARPQ8N350 705 aaPredicted RBP12.9□□□□□ -0.34
SPG7-209ENST00000564047 OR13J1Q8NGT2 312 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 GANCQ8TET4 914 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 EID2BQ96D98 161 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 ITM2CQ9NQX7 267 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 MOCS1Q9NZB8 636 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 NCKAP1Q9Y2A7 1128 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 PKP3Q9Y446 797 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 KCTD3Q9Y597 815 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 R4GN57 208 aa12.9□□□□□ -0.34
SPG7-209ENST00000564047 A0A087WUV0 522 aaPredicted RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 TCRBV9S1A1TA0A576 114 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CCDC78A2IDD5 438 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 A8MX80 341 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 H7C0S8 307 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 TSPAN6O43657 245 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 RPP40O75818 363 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 DCNP07585 359 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 C1SP09871 688 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 NUDT17P0C025 328 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 STX2P32856 288 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 STC1P52823 247 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 TAS2R38P59533 333 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms