RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 AGAP2Q99490 1192 aa19.34■□□□□ 0.69
SPSB3-204ENST00000563741 GABRG3Q99928 467 aa19.34■□□□□ 0.69
SPSB3-204ENST00000563741 NLE1Q9NVX2 485 aaPredicted RBP19.34■□□□□ 0.69
SPSB3-204ENST00000563741 TBK1Q9UHD2 729 aa19.34■□□□□ 0.69
SPSB3-204ENST00000563741 ATG2BQ96BY7 2078 aa19.33■□□□□ 0.69
SPSB3-204ENST00000563741 RGS16O15492 202 aaPredicted RBP19.33■□□□□ 0.68
SPSB3-204ENST00000563741 RPP40O75818 363 aaKnown RBP19.33■□□□□ 0.68
SPSB3-204ENST00000563741 FAM155BO75949 473 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 INHBAP08476 426 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 SP9P0CG40 484 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 LHCGRP22888 699 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 ITGB7P26010 798 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 NTSR1P30989 418 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 CCR3P51677 355 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 TMPRSS15P98073 1019 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 PDE1BQ01064 536 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 SEMG2Q02383 582 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 FBXO43Q4G163 708 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 TNFAIP8L3Q5GJ75 292 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 TEDDM1Q5T9Z0 273 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 DSG4Q86SJ6 1040 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 CNTN4Q8IWV2 1026 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 CYP4X1Q8N118 509 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 NDUFAF2Q8N183 169 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 PKNOX2Q96KN3 472 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 ATP6V1G3Q96LB4 118 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 TBATAQ96M53 351 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 GPR63Q9BZJ6 419 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 ZFYVE1Q9HBF4 777 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 PRMT8Q9NR22 394 aaPredicted RBP19.33■□□□□ 0.68
SPSB3-204ENST00000563741 IARS2Q9NSE4 1012 aaKnown RBP19.33■□□□□ 0.68
SPSB3-204ENST00000563741 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 IL17CQ9P0M4 197 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 B4GALT6Q9UBX8 382 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 CKAP5Q14008 2032 aa19.33■□□□□ 0.68
SPSB3-204ENST00000563741 SLC7A4O43246 635 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 ADAM23O75077 832 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 IL1BP01584 269 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 TIMP2P16035 220 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 PRAMEP78395 509 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 CSTF1Q05048 431 aaKnown RBP19.32■□□□□ 0.68
SPSB3-204ENST00000563741 GAS6Q14393 721 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 TMED2Q15363 201 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 ZNF528Q3MIS6 628 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 KCTD16Q68DU8 428 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 CRTC1Q6UUV9 634 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 Q6ZS52 159 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 MMAAQ8IVH4 418 aaKnown RBP19.32■□□□□ 0.68
SPSB3-204ENST00000563741 ARRDC3Q96B67 414 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 SUDS3Q9H7L9 328 aaPredicted RBP19.32■□□□□ 0.68
SPSB3-204ENST00000563741 PCDH12Q9NPG4 1184 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 ZNF180Q9UJW8 692 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 IKBKGQ9Y6K9 419 aa19.32■□□□□ 0.68
SPSB3-204ENST00000563741 A8MX80 341 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 STX7O15400 261 aaKnown RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 RNF40O75150 1001 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 CLDN7O95471 211 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 KLF8O95600 359 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 AGBL2Q5U5Z8 902 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 LRRC66Q68CR7 880 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 KIAA1211LQ6NV74 962 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 FAM167BQ9BTA0 163 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 RSPH9Q9H1X1 276 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 BCCIPQ9P287 314 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 CCDC162PA2VCL2 907 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 OR51F1A6NGY5 319 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 C1QTNF3-AMACRE9PGA6 284 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 SYNCRIPO60506 623 aaKnown RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 F7P08709 466 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 CXCL12P48061 93 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 PSMD8P48556 350 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 ZNF470Q6ECI4 717 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 NEPROQ6NW34 567 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 PACS1Q6VY07 963 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 TXNDC5Q8NBS9 432 aaKnown RBP19.31■□□□□ 0.68
SPSB3-204ENST00000563741 OR6P1Q8NGX9 317 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 TLCD1Q96CP7 247 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 CDKN2AIPNLQ96HQ2 116 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 PPP1R16AQ96I34 528 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 BPIFA1Q9NP55 256 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 FKBPLQ9UIM3 349 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 PKP3Q9Y446 797 aa19.31■□□□□ 0.68
SPSB3-204ENST00000563741 FANCMQ8IYD8 2048 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 FOXO6A8MYZ6 492 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 ATG13O75143 517 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 GOT2P00505 430 aaKnown RBP19.3■□□□□ 0.68
SPSB3-204ENST00000563741 NBL1P41271 181 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 SLC1A2P43004 574 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 MRPS21P82921 87 aaKnown RBP19.3■□□□□ 0.68
SPSB3-204ENST00000563741 THOC5Q13769 683 aaKnown RBP19.3■□□□□ 0.68
SPSB3-204ENST00000563741 TRMT11Q7Z4G4 463 aaKnown RBP19.3■□□□□ 0.68
SPSB3-204ENST00000563741 PTAR1Q7Z6K3 402 aaPredicted RBP19.3■□□□□ 0.68
SPSB3-204ENST00000563741 TTC7BQ86TV6 843 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 DENND6AQ8IWF6 608 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 MZB1Q8WU39 189 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 CPNE1Q99829 537 aa19.3■□□□□ 0.68
SPSB3-204ENST00000563741 A0A1W2PQF6 199 aa19.29■□□□□ 0.68
SPSB3-204ENST00000563741 HMGB1P1B2RPK0 211 aaPredicted RBP19.29■□□□□ 0.68
SPSB3-204ENST00000563741 H7C0S8 307 aa19.29■□□□□ 0.68
SPSB3-204ENST00000563741 SPINT1O43278 529 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms