RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ZMYM5Q9UJ78 669 aa10.47□□□□□ -0.73
RNF40-204ENST00000563683 TRAF6Q9Y4K3 522 aa10.47□□□□□ -0.73
RNF40-204ENST00000563683 ADAMTSL1Q8N6G6 1762 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 OR51F1A6NGY5 319 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 ZNF839A8K0R7 811 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 SYCE1LA8MT33 242 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 KCNU1A8MYU2 1149 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 SYNCRIPO60506 623 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 DUSP11O75319 330 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 HSPA1AP0DMV8 641 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 HSPA1BP0DMV9 641 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 ATP5C1P36542 298 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 CXCR3P49682 368 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 TMED10P49755 219 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 DDX39BQ13838 428 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 FRG1Q14331 258 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 HERC3Q15034 1050 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 PPM1LQ5SGD2 360 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 GPRIN1Q7Z2K8 1008 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 TNIP2Q8NFZ5 429 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 TMIGD2Q96BF3 282 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 PPP1R10Q96QC0 940 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 ADGRE3Q9BY15 652 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 SELENONQ9NZV5 590 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 PRKAG2Q9UGJ0 569 aa10.46□□□□□ -0.73
RNF40-204ENST00000563683 LSM7Q9UK45 103 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 PTBP2Q9UKA9 531 aaKnown RBP10.46□□□□□ -0.73
RNF40-204ENST00000563683 TMEM233B4DJY2 109 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 HGFP14210 728 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 ZNF26P17031 533 aaPredicted RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 GLDCP23378 1020 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 SCNN1AP37088 669 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 SLC1A2P43004 574 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 RFTN1Q14699 578 aaPredicted RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 RPS27LQ71UM5 84 aaKnown RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 CARM1Q86X55 608 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 TMEM102Q8N9M5 508 aaPredicted RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 NTAN1Q96AB6 310 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 HGH1Q9BTY7 390 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 TRMT13Q9NUP7 481 aaKnown RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 SEPT3Q9UH03 358 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 TCAF1Q9Y4C2 921 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 TRIM38O00635 465 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 FBP2O00757 339 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 PQBP1O60828 265 aaKnown RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 SERPINB7O75635 380 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 LINC00032P0C843 101 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 ITGA7Q13683 1181 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 GRB14Q14449 540 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 HECTD2Q5U5R9 776 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 ZNF467Q7Z7K2 595 aaPredicted RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 GPR180Q86V85 440 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 MIER2Q8N344 545 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 RDH11Q8TC12 318 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 CASP10Q92851 521 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 ISOC1Q96CN7 298 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 HMCESQ96FZ2 354 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 NMRK2Q9NPI5 230 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 OLA1Q9NTK5 396 aaKnown RBP10.46□□□□□ -0.74
RNF40-204ENST00000563683 PKD2L2Q9NZM6 624 aa10.46□□□□□ -0.74
RNF40-204ENST00000563683 GPR32O75388 356 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 IPO13O94829 963 aaKnown RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 MAGEA3P43357 314 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 CCR3P51677 355 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 SLC7A2P52569 658 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 ARHGEF7Q14155 803 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 PAFAH1B3Q15102 231 aaKnown RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 AASDHQ4L235 1098 aaPredicted RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 ATP6AP1LQ52LC2 224 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 SAMD4BQ5PRF9 694 aaKnown RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 RIN3Q8TB24 985 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 TSPAN18Q96SJ8 248 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 COQ10BQ9H8M1 238 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 PLAC1Q9HBJ0 212 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 PALMDQ9NP74 551 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 RNF11Q9Y3C5 154 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 FUOMA2VDF0 154 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 H7C4K7 107 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 CD3EAPO15446 510 aaKnown RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 RPLP2P05387 115 aaKnown RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 HOXD12P35452 270 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 HALP42357 657 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 ARHGDIAP52565 204 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 CEACAM7Q14002 265 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 IKBKEQ14164 716 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 BTG3Q14201 252 aaPredicted RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 CYP51A1Q16850 503 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 KCTD21Q4G0X4 260 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 GDF6Q6KF10 455 aaPredicted RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 ZNF420Q8TAQ5 688 aaPredicted RBP10.45□□□□□ -0.74
RNF40-204ENST00000563683 STAG3L4Q8TBR4 150 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 KCTD13Q8WZ19 329 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 TOP1MTQ969P6 601 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 RANBP9Q96S59 729 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 EVPLQ92817 2033 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 STX16-NPEPL1H3BU86 382 aa10.45□□□□□ -0.74
RNF40-204ENST00000563683 IRAK2O43187 625 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms