RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 FEZ2Q9UHY8 353 aaPredicted RBP4.75□□□□□ -1.65
CDR2-203ENST00000563573 FBXW11Q9UKB1 542 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 MRFAP1Q9Y605 127 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 REV3LO60673 3130 aa4.75□□□□□ -1.65
CDR2-203ENST00000563573 CLUHO75153 1309 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CTAGE15A4D2H0 777 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 ZNF840PA6NDX5 716 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CCDC188H7C350 402 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 PGRMC1O00264 195 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 MDM4O15151 490 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CCL16O15467 120 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TLR5O60602 858 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 APOEP02649 317 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 FGGP02679 453 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 ZDHHC11BP0C7U3 371 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CTAGE8P0CG41 777 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 MYL4P12829 197 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 HNRNPLP14866 589 aaKnown RBP eCLIP4.74□□□□□ -1.656e-7■□□□□ 10.8
CDR2-203ENST00000563573 ZFXP17010 805 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 HMGA1P17096 107 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 HDCP19113 662 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DDX6P26196 483 aaKnown RBP eCLIP4.74□□□□□ -1.65
CDR2-203ENST00000563573 GABRR2P28476 465 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 HOXA9P31269 272 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 ADRA1BP35368 520 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 NRIP1P48552 1158 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 HARS2P49590 506 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 CXCR3P49682 368 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TUBP50607 506 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CDH6P55285 790 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 WNT3AP56704 352 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TAS2R40P59535 323 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CAMK1Q14012 370 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TFDP2Q14188 446 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DUSP6Q16828 381 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 LRIT3Q3SXY7 679 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 ATP13A4Q4VNC1 1196 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TFDP3Q5H9I0 405 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 PPP6R3Q5H9R7 873 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 KCNT1Q5JUK3 1230 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DAB2IPQ5VWQ8 1189 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 NUGGCQ68CJ6 796 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 MSANTD2Q6P1R3 559 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 PDZD4Q76G19 769 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 BZW1Q7L1Q6 419 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 BHLHA9Q7RTU4 235 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 MAATS1Q7Z4T9 603 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 MRGPREQ86SM8 312 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CTAGE6Q86UF2 777 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 FAM131BQ86XD5 332 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 VSIG1Q86XK7 387 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 THNSL2Q86YJ6 484 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 RFX6Q8HWS3 928 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CTAGE4Q8IX94 777 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 RASGEF1CQ8N431 466 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 EFHBQ8N7U6 833 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 GLB1L3Q8NCI6 653 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 CMASQ8NFW8 434 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 CCDC26Q8TAB7 109 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 DQX1Q8TE96 717 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 GDPD5Q8WTR4 605 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 SLC22A17Q8WUG5 538 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 KRT35Q92764 455 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 NTAN1Q96AB6 310 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 C1orf74Q96LT6 269 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 RUNDC3BQ96NL0 473 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 HAPLN3Q96S86 360 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 AGAP2Q99490 1192 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DDX50Q9BQ39 737 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 FERMT1Q9BQL6 677 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CALN1Q9BXU9 219 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 OSBPL8Q9BZF1 889 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TKTL2Q9H0I9 626 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DHX35Q9H5Z1 703 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 NMUR1Q9HB89 426 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 PIGVQ9NUD9 493 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 DONSONQ9NYP3 566 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TRPS1Q9UHF7 1281 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 RASAL2Q9UJF2 1139 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 LSM7Q9UK45 103 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 TTC7AQ9ULT0 858 aaPredicted RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 ZNF510Q9Y2H8 683 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 HBS1LQ9Y450 684 aaKnown RBP4.74□□□□□ -1.65
CDR2-203ENST00000563573 OBSL1O75147 1896 aa4.74□□□□□ -1.65
CDR2-203ENST00000563573 TRAV19A0A0A6YYK7 116 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 LRRD1A4D1F6 860 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 EFCAB8A8MWE9 144 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 KCNU1A8MYU2 1149 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ZNF487B1APH4 448 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 PI4K2BG5E9Z4 385 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 EEF2KO00418 725 aaKnown RBP4.73□□□□□ -1.65
CDR2-203ENST00000563573 TRIM24O15164 1050 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 ZNF185O15231 689 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 CREB3O43889 395 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 NRP2O60462 931 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 TBX18O95935 607 aa4.73□□□□□ -1.65
CDR2-203ENST00000563573 IGLV3-25P01717 112 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms