RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TRMT11Q7Z4G4 463 aaKnown RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 STRA8Q7Z7C7 330 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PNPLA1Q8N8W4 532 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 OR2T3Q8NH03 318 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 RPLP0P6Q8NHW5 317 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 PPP1R16AQ96I34 528 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 CPNE1Q99829 537 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 C19orf43Q9BQ61 176 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 FAM167BQ9BTA0 163 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 ARHGEF3Q9NR81 526 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 MARCH4Q9P2E8 410 aaPredicted RBP10.16□□□□□ -0.78
SMG1-208ENST00000563448 PKP3Q9Y446 797 aa10.16□□□□□ -0.78
SMG1-208ENST00000563448 BPTFQ12830 3046 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 IQANK1A0A1B0GTG1 560 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 MID1O15344 667 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 AHSGP02765 367 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 CHRNB1P11230 501 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 ADRB3P13945 408 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 BPIP17213 487 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 XPAP23025 273 aaPredicted RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 MC4RP32245 332 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 FOXN2P32314 431 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 DRD3P35462 400 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 MMP12P39900 470 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 GP5P40197 560 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 HADHAP40939 763 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 RPS14P62263 151 aaKnown RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 CST6Q15828 149 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 GRTP1Q5TC63 336 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 FAM46CQ5VWP2 391 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 FBXL19Q6PCT2 694 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 ZNF852Q6ZMS4 543 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 RFLNAQ6ZTI6 216 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 ERN2Q76MJ5 926 aaKnown RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 LDB1Q86U70 411 aaPredicted RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 TRABD2AQ86V40 505 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 EXOC3L1Q86VI1 746 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 CBARPQ8N350 705 aaPredicted RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 AADATQ8N5Z0 425 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 C2CD4AQ8NCU7 369 aaPredicted RBP10.15□□□□□ -0.78
SMG1-208ENST00000563448 GPR150Q8NGU9 434 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 PBXIP1Q96AQ6 731 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 RBBP8Q99708 897 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 HDAC8Q9BY41 377 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 CATSPERZQ9NTU4 200 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 WNT16Q9UBV4 365 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 ITM2BQ9Y287 266 aa10.15□□□□□ -0.78
SMG1-208ENST00000563448 CEP192Q8TEP8 1941 aa10.15□□□□□ -0.79
SMG1-208ENST00000563448 A0A1W2PPM1 405 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 GAPDHSO14556 408 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 CD3EAPO15446 510 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 RNASEH1O60930 286 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 CREB1P16220 341 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ZNF30P17039 623 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 NFKBIAP25963 317 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 P2RY2P41231 377 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ABCG1P45844 678 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 CDKN1CP49918 316 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 SERPINB9P50453 376 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 NEK3P51956 506 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 STC1P52823 247 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 CSE1LP55060 971 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 MAGOHP61326 146 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 CNTN1Q12860 1018 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 BMPR2Q13873 1038 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ARHGEF7Q14155 803 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 STARD3Q14849 445 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ZNF789Q5FWF6 425 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 PIP5KL1Q5T9C9 394 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ZNF776Q68DI1 518 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 ZNF470Q6ECI4 717 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ERAP2Q6P179 960 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 AFTPHQ6ULP2 937 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 CACUL1Q86Y37 369 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 CILP2Q8IUL8 1156 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 LMNTD2Q8IXW0 634 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 GPR26Q8NDV2 337 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 CALML6Q8TD86 181 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 SGSM3Q96HU1 749 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 MKRN2Q9H000 416 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 SLC6A17Q9H1V8 727 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 DYRK4Q9NR20 520 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 FBXO6Q9NRD1 293 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 NSMCE4AQ9NXX6 385 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 FBXO5Q9UKT4 447 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 MTF2Q9Y483 593 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 EML5Q05BV3 1969 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 TRIM49D1C9J1S8 452 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 AREL1O15033 823 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 HAUS5O94927 633 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 ADH1BP00325 375 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 GM2AP17900 193 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 KRT15P19012 456 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 C5AR1P21730 350 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 TARSP26639 723 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 ATP5DP30049 168 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms