RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SGTBQ96EQ0 304 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SH3YL1Q96HL8 342 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 C8orf33Q9H7E9 229 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 CD274Q9NZQ7 290 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 NOX1Q9Y5S8 564 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ANKDD1BA6NHY2 528 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 C2orf81A6NN90 581 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLC30A4O14863 429 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 KRT33BQ14525 404 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SNX20Q7Z614 316 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 KDM1BQ8NB78 822 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 EXOC2Q96KP1 924 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DPYSL5Q9BPU6 564 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 TMEM138Q9NPI0 162 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 A0A1W2PPM1 405 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PGRMC2O15173 223 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PROM1O43490 865 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 NPPAP01160 153 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CCNYL3P0C7X3 344 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MAPTP10636 758 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 GMPRP36959 345 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 GRIA1P42261 906 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PRKG2Q13237 762 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 OXA1LQ15070 435 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DPP8Q6V1X1 898 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 KCNMB4Q86W47 210 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 IFNLR1Q8IU57 520 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 UBQLNLQ8IYU4 475 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZNF781Q8N8C0 355 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 URGCPQ8TCY9 931 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 GTF2H4Q92759 462 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 HDAC10Q969S8 669 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 IFT43Q96FT9 208 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZBED3Q96IU2 234 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 MKS1Q9NXB0 559 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DNAJB9Q9UBS3 223 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CLCA2Q9UQC9 943 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 TAF6LQ9Y6J9 622 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MYO5BQ9ULV0 1848 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 TULP4Q9NRJ4 1543 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 A0A087X0B3 334 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RAB4AP20338 218 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MAGP20916 626 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MAOBP27338 520 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 HTR7P34969 479 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 KANK2Q63ZY3 851 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 FAM198BQ6UWH4 519 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DENND6BQ8NEG7 585 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CCDC106Q9BWC9 280 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ACE2Q9BYF1 805 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 NIPAL2Q9H841 368 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PAK1IP1Q9NWT1 392 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 RFPL3O75679 317 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 SCELO95171 688 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 GUCA1CO95843 209 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 CYP11A1P05108 521 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 LEPRP48357 1165 aaKnown RBP6.25□□□□□ -1.41
CLK3-212ENST00000563418 RPL6Q02878 288 aaKnown RBP6.25□□□□□ -1.41
CLK3-212ENST00000563418 METTL25Q8N6Q8 603 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ARL6IP6Q8N6S5 226 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 FBXO30Q8TB52 745 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 C17orf75Q9HAS0 396 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 RNF6Q9Y252 685 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 A0A1B0GVM2 712 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ARIH2O95376 493 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 CYP2C18P33260 490 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NR4A2P43354 598 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NPY2RP49146 381 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 RGS4P49798 205 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 HK3P52790 923 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ADAM15Q13444 863 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 SPDYE7PQ495Y7 208 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ATAD3CQ5T2N8 411 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 REP15Q6BDI9 236 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 CFAP206Q8IYR0 622 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 FANK1Q8TC84 345 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NPLQ9BXD5 320 aaPredicted RBP6.25□□□□□ -1.41
CLK3-212ENST00000563418 ZNF436Q9C0F3 470 aaPredicted RBP6.25□□□□□ -1.41
CLK3-212ENST00000563418 USP18Q9UMW8 372 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 EI24O14681 340 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 CASKO14936 926 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 INPPL1O15357 1258 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ACSL4O60488 711 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NMT2O60551 498 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 HLA-EP13747 358 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NFKB1P19838 968 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 IDH2P48735 452 aaKnown RBP6.25□□□□□ -1.41
CLK3-212ENST00000563418 CDH13P55290 713 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 ERVK-8P63133 956 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NOMO3P69849 1222 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 CUL2Q13617 745 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 NOMO1Q15155 1222 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 MGAT5BQ3V5L5 792 aa6.25□□□□□ -1.41
CLK3-212ENST00000563418 PIK3R6Q5UE93 754 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms