RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CYP4F2P78329 520 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 CDK3Q00526 305 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 NFKB2Q00653 900 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF235Q14590 738 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 SMTNL2Q2TAL5 461 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 MANEAQ5SRI9 462 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 PPP1R2P3Q6NXS1 205 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 RFLNAQ6ZTI6 216 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 POLNQ7Z5Q5 900 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 PIM3Q86V86 326 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 LZTR1Q8N653 840 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 RCBTB1Q8NDN9 531 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 HTR3CQ8WXA8 447 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 COL26A1Q96A83 441 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 MGME1Q9BQP7 344 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 CLMPQ9H6B4 373 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 PHPT1Q9NRX4 125 aaPredicted RBP16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 TRNAU1APQ9NX07 287 aaKnown RBP16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 PLEKHM1Q9Y4G2 1056 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 IGHV5-10-1A0A0J9YXX1 117 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 A0A1W2PQC6 194 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 WISP1O95388 367 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 SOD1P00441 154 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 ITGB2P05107 769 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 FAM87AP0C7U9 286 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 GZMAP12544 262 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 CD1CP29017 333 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF135P52742 658 aaPredicted RBP16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 CTBSQ01459 385 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 ASIC2Q16515 512 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 DPYSL2Q16555 572 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 TBR1Q16650 682 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 TXNRD3NBQ6F5E7 133 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 SLC30A9Q6PML9 568 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 Q6ZVL8 140 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 PRICKLE2Q7Z3G6 844 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 TECPR1Q7Z6L1 1165 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 NAGSQ8N159 534 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF653Q96CK0 615 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 CSPG4P5Q96PW8 444 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 SMIM14Q96QK8 99 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 GSDMCQ9BYG8 508 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 ZWILCHQ9H900 591 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 STARD5Q9NSY2 213 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 SEPT10Q9P0V9 454 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 PHTF1Q9UMS5 762 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 SLC17A4Q9Y2C5 497 aa16.77■□□□□ 0.28
HDGFL3-203ENST00000563404 RHPN2P1A8MT19 583 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 H3BRJ5 948 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 PPM1DO15297 605 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 PGLSO95336 258 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 FGF3P11487 239 aaPredicted RBP16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 CTPS1P17812 591 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 PCK1P35558 622 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 ADCY8P40145 1251 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 KCNC4Q03721 635 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 NKAIN2Q5VXU1 208 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 RAET1GQ6H3X3 334 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 JPH3Q8WXH2 748 aaPredicted RBP16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 HSPH1Q92598 858 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 SCRN2Q96FV2 425 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 CCDC74BQ96LY2 380 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 TRIM4Q9C037 500 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 AIPL1Q9NZN9 384 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 MYO1AQ9UBC5 1043 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 PPIL1Q9Y3C6 166 aa16.76■□□□□ 0.27
HDGFL3-203ENST00000563404 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 A0A1W2PQ67 120 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 IVLP07476 585 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 PDHA1P08559 390 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 RARAP10276 462 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 SKILP12757 684 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 TEAD1P28347 426 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 CSF2RBP32927 897 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 HSPA9P38646 679 aaKnown RBP16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 PRKCIP41743 596 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 IHHQ14623 411 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 NFKBIBQ15653 356 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 DOK6Q6PKX4 331 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 PIH1D2Q8WWB5 315 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 SCARF2Q96GP6 870 aaPredicted RBP16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 ARHGAP9Q9BRR9 750 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 B3GNT4Q9C0J1 378 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 TMEM9Q9P0T7 183 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 CD84Q9UIB8 345 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 TMEM98Q9Y2Y6 226 aa16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 TLN1Q9Y490 2541 aaKnown RBP16.75■□□□□ 0.27
HDGFL3-203ENST00000563404 GOLGA6CA6NDK9 693 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 GOLGA6BA6NDN3 693 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 PSMD11O00231 422 aa16.74■□□□□ 0.27
HDGFL3-203ENST00000563404 HGSO14964 777 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms