RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OR1A2Q9Y585 309 aa8.54□□□□□ -1.04
UBR1-204ENST00000563239 CNOT1A5YKK6 2376 aaKnown RBP8.54□□□□□ -1.04
UBR1-204ENST00000563239 CABIN1Q9Y6J0 2220 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 AURKAO14965 403 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 CEP104O60308 925 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 SDC3O75056 442 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PIAS2O75928 621 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 METTL18O95568 372 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 AGTP01019 485 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 FGGP02679 453 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 FUCA1P04066 466 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 CSF2P04141 144 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 ATP1A1P05023 1023 aaKnown RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 CEACAM1P13688 526 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 NME1P15531 152 aaKnown RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 ZNF30P17039 623 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 DGKAP23743 735 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 ARRB1P49407 418 aaPredicted RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 NOVA1P51513 510 aaKnown RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 DPTQ07507 201 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 MPP3Q13368 585 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 MSLNQ13421 630 aaPredicted RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 ARHGEF7Q14155 803 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 NFATC4Q14934 902 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 SLC1A5Q15758 541 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PPM1JQ5JR12 505 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 ZNF569Q5MCW4 686 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 KCTD11Q693B1 232 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 DENND5AQ6IQ26 1287 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PSAPL1Q6NUJ1 521 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 RANBP10Q6VN20 620 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 MACC1Q6ZN28 852 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 LYSMD3Q7Z3D4 306 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PRUNE1Q86TP1 453 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 NLRP8Q86W28 1048 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PARGQ86W56 976 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 NDUFAF2Q8N183 169 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 RASGEF1CQ8N431 466 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 TTC30BQ8N4P2 665 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 OXR1Q8N573 874 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 SLC25A41Q8N5S1 370 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 SCAMP4Q969E2 229 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 TEX101Q9BY14 249 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 MAGEE1Q9HCI5 957 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 DNAJC28Q9NX36 388 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 CD84Q9UIB8 345 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 CNOT6Q9ULM6 557 aaKnown RBP8.53□□□□□ -1.04
UBR1-204ENST00000563239 JRKLQ9Y4A0 524 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 NCOR2Q9Y618 2525 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 SPTBN2O15020 2390 aa8.53□□□□□ -1.04
UBR1-204ENST00000563239 C1orf232A0A0U1RR37 186 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SPAARA0A1B0GVQ0 90 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 MED19A0JLT2 244 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 TMEM202A6NGA9 273 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 TRIM38O00635 465 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 FANCGO15287 622 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 YKT6O15498 198 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 FLRT2O43155 660 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 ITGAVP06756 1048 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 ETS1P14921 441 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 NFKBIAP25963 317 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 TEAD1P28347 426 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SPINT3P49223 89 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 KIAA1024LP59773 190 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 CCDC173Q0VFZ6 552 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SNX1Q13596 522 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 PTK2BQ14289 1009 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SPARCL1Q14515 664 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 CCNG2Q16589 344 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 KCTD19Q17RG1 926 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 ALG11Q2TAA5 492 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 N4BP2L1Q5TBK1 243 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 ITPRIPL1Q6GPH6 555 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 DRICH1Q6PGQ1 229 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 ZNF765Q7L2R6 523 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 GLRX5Q86SX6 157 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 RAVER1Q8IY67 606 aaKnown RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 NRSN1Q8IZ57 195 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 RBFAQ8N0V3 343 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 PRELID2Q8N945 189 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 GPR26Q8NDV2 337 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 IPMKQ8NFU5 416 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 RHBDD1Q8TEB9 315 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SETD7Q8WTS6 366 aaKnown RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 COG1Q8WTW3 980 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 OR1E3Q8WZA6 343 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 TSACCQ96A04 125 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 AP2M1Q96CW1 435 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 MS4A14Q96JA4 679 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 APOL2Q9BQE5 337 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 FICDQ9BVA6 458 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 RIOK2Q9BVS4 552 aaKnown RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 FRMD8P1Q9BZ68 369 aaPredicted RBP8.52□□□□□ -1.05
UBR1-204ENST00000563239 CLPBQ9H078 707 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms