RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ACTR3P61158 418 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ZXDBP98169 803 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 SATB1Q01826 763 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 CREMQ03060 361 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 BTKQ06187 659 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 CCDC6Q16204 474 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 NXNQ6DKJ4 435 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 CUZD1Q86UP6 607 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 GPR65Q8IYL9 337 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 TMA16Q96EY4 203 aaKnown RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 CATSPER2Q96P56 530 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 TCF12Q99081 682 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 TRMOQ9BU70 441 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 GSTO2Q9H4Y5 243 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 POLR3BQ9NW08 1133 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 VPS51Q9UID3 782 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 RGSL1A5PLK6 1076 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CCNT2O60583 730 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 NDUFS3O75489 264 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RHOBTB1O94844 696 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 SPATA31D3P0C874 917 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 THRAP10827 490 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CSF2RAP15509 400 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ITGB8P26012 769 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 GCKP35557 465 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ABL2P42684 1182 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RHOAP61586 193 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 PEX6Q13608 980 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CDH18Q13634 790 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ZNF678Q5SXM1 525 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 PGM2L1Q6PCE3 622 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 SPATA31D4Q6ZUB0 917 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TTC30BQ8N4P2 665 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 DCAF4L2Q8NA75 395 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 WFDC5Q8TCV5 224 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ALG14Q96F25 216 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 YME1L1Q96TA2 773 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ZBP1Q9H171 429 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 STX18Q9P2W9 335 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 DNMT3BQ9UBC3 853 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 FKBPLQ9UIM3 349 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 G3BP2Q9UN86 482 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 ASB3Q9Y575 518 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TIMP1P01033 207 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 GABRR2P28476 465 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 FMO4P31512 558 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CYP4F8P98187 520 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 SLC34A1Q06495 639 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 HERC3Q15034 1050 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 UNC50Q53HI1 259 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TMEM198Q66K66 360 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RPS27LQ71UM5 84 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 SNX32Q86XE0 403 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 MYLK4Q86YV6 388 aaPredicted RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 DEFB107AQ8IZN7 70 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RYBPQ8N488 228 aaPredicted RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 RP9Q8TA86 221 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 RHEBL1Q8TAI7 183 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CCDC68Q9H2F9 335 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TFB2MQ9H5Q4 396 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 SYTL2Q9HCH5 934 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TNFRSF12AQ9NP84 129 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TAS2R13Q9NYV9 303 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 HACD3Q9P035 362 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 MED16Q9Y2X0 877 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 STX7O15400 261 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 TGM5O43548 720 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TBX10O75333 385 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 SKAP2O75563 359 aaPredicted RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 SRP72O76094 671 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 SUPT7LO94864 414 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 MC4RP32245 332 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 HERVK_113P63132 956 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 OR4D1Q15615 310 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 LRRC26Q2I0M4 334 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 MFN1Q8IWA4 741 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CEP70Q8NHQ1 597 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 SHKBP1Q8TBC3 707 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 MRPS31Q92665 395 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 EXT2Q93063 718 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 RSRC1Q96IZ7 334 aaKnown RBP9.79□□□□□ -0.84
SMG1-205ENST00000561947 ZNF570Q96NI8 536 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 BEGAINQ9BUH8 593 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 ERVK-6Q9BXR3 956 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 MEAF6Q9HAF1 191 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 CDH22Q9UJ99 828 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 FIS1Q9Y3D6 152 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 LRRC42Q9Y546 428 aa9.79□□□□□ -0.84
SMG1-205ENST00000561947 TRIM43BA6NCK2 446 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 H3BMM5 538 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 H7C0S8 307 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms