RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PPIDQ08752 370 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 ZBTB17Q13105 803 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 SLC9A4Q6AI14 798 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 NPNTQ6UXI9 565 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 RBM44Q6ZP01 1051 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 TAF8Q7Z7C8 310 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 LPCAT1Q8NF37 534 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 CCL4L1Q8NHW4 92 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 PTCD2Q8WV60 388 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 TEX101Q9BY14 249 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 HAUS2Q9NVX0 235 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 AMACRQ9UHK6 382 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 PPIL1Q9Y3C6 166 aa17.18■□□□□ 0.34
CDC42BPB-208ENST00000561271 ZNF487B1APH4 448 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 B4DGG1 531 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 PDX1P52945 283 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 DYNLT1P63172 113 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 TBC1D25Q3MII6 688 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 C3orf38Q5JPI3 329 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 TECPR1Q7Z6L1 1165 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 PDZD3Q86UT5 571 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 CBARPQ8N350 705 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 SDR16C5Q8N3Y7 309 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 SNIP1Q8TAD8 396 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 RNF25Q96BH1 459 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 ATXN7L3BQ96GX2 97 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 FRMD8Q9BZ67 464 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 GOLPH3Q9H4A6 298 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 CARS2Q9HA77 564 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 KCTD5Q9NXV2 234 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 INTUQ9ULD6 942 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 ENTPD2Q9Y5L3 495 aa17.17■□□□□ 0.34
CDC42BPB-208ENST00000561271 A0A1W2PNU3 283 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 PDE2AO00408 941 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 SPOPO43791 374 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 SOD1P00441 154 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 PRLP01236 227 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 JCHAINP01591 159 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 MMP2P08253 660 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 KRT10P13645 584 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 COMTP21964 271 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 CA4P22748 312 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 ITPKBP27987 946 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 ACTN2P35609 894 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 EIF2S3P41091 472 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 CD86P42081 329 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 ABCG1P45844 678 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 GPR1P46091 355 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 GNPDA1P46926 289 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 IFI35P80217 286 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 AP1B1Q10567 949 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 SPIDRQ14159 915 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 DOK6Q6PKX4 331 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 B4GALNT4Q76KP1 1039 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 TRIM74Q86UV6 250 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 VSIG1Q86XK7 387 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 RFX6Q8HWS3 928 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 NDUFAF2Q8N183 169 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 FAM46DQ8NEK8 389 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 SCAMP4Q969E2 229 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 AP2M1Q96CW1 435 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 OLFM3Q96PB7 478 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 ABCG8Q9H221 673 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 PCDH9Q9HC56 1237 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 TFR2Q9UP52 801 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 SATB2Q9UPW6 733 aa17.16■□□□□ 0.34
CDC42BPB-208ENST00000561271 PMS2P1A4D2B8 440 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 NOBOXO60393 691 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 TCEA3O75764 348 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 FUCA1P04066 466 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 CEACAM5P06731 702 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 ZNF30P17039 623 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 CES1P23141 567 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 POLD2P49005 469 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 STC1P52823 247 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 TCEAL1Q15170 157 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 ODF2Q5BJF6 829 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 LRRC38Q5VT99 294 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 MFSD7Q6UXD7 560 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 CNTD1Q8N815 330 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 GPR156Q8NFN8 814 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 FGF11Q92914 225 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 MAK16Q9BXY0 300 aaKnown RBP17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 POLR1BQ9H9Y6 1135 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 SEPT10Q9P0V9 454 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 SUFUQ9UMX1 484 aa17.15■□□□□ 0.34
CDC42BPB-208ENST00000561271 SDK2Q58EX2 2172 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 C1orf232A0A0U1RR37 186 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 D6RAR5 112 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 NTN3O00634 580 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 CLDN7O95471 211 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 RPLP0P05388 317 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 TEAD1P28347 426 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 SLC1A1P43005 524 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 MAGEA1P43355 309 aa17.14■□□□□ 0.33
CDC42BPB-208ENST00000561271 NOP2P46087 812 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms