RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 EXOC6Q8TAG9 804 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 C9orf43Q8TAL5 461 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 FEZF2Q8TBJ5 459 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 GRAPLQ8TC17 118 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 POC1BQ8TC44 478 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PTPMT1Q8WUK0 201 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 ANKRD49Q8WVL7 239 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 GLMPQ8WWB7 406 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ARHGAP45Q92619 1136 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FCGR1BQ92637 280 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ZNF75CPQ92670 426 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 RABGGTAQ92696 567 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 GLG1Q92896 1179 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 EXT2Q93063 718 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SLAMF9Q96A28 289 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 RAB7BQ96AH8 199 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TMEM125Q96AQ2 219 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SPSB1Q96BD6 273 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ZBTB8AQ96BR9 441 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 NXNL1Q96CM4 212 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 AP2M1Q96CW1 435 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SPACA9Q96E40 222 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 RNF31Q96EP0 1072 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SGF29Q96ES7 293 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 LINGO1Q96FE5 620 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM84AQ96KN4 292 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CNOT6LQ96LI5 555 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 ZNF830Q96NB3 372 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 KLHL5Q96PQ7 755 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FYTTD1Q96QD9 318 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 OR2A14Q96R47 310 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SMC6Q96SB8 1091 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DIRC2Q96SL1 478 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 NPAS1Q99742 590 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SEMA3CQ99985 751 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TMEM47Q9BQJ4 181 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ADGRE3Q9BY15 652 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ACTRT3Q9BYD9 372 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRIM7Q9C029 511 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MTMR12Q9C0I1 747 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SPATC1LQ9H0A9 340 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 STMN4Q9H169 189 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 ISCUQ9H1K1 167 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CARD9Q9H257 536 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 IKZF4Q9H2S9 585 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PNNQ9H307 717 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 FN3KQ9H479 309 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 COQ10BQ9H8M1 238 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MINDY3Q9H8M7 445 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MRPS18AQ9NVS2 196 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 DPP3Q9NY33 737 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MTMR4Q9NYA4 1195 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CYP39A1Q9NYL5 469 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PLK2Q9NYY3 685 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM30AQ9NZY2 134 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TBC1D7Q9P0N9 293 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CLIP2Q9UDT6 1046 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FBXO40Q9UH90 709 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FBXW11Q9UKB1 542 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CHMP2BQ9UQN3 213 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TNFSF13BQ9Y275 285 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MRPS7Q9Y2R9 242 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 U3KQE9 123 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SPATA31A3Q5VYP0 1347 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TTC21BQ7Z4L5 1316 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRGV11A0A075B6L2 103 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM237AA0A1B0GTK4 181 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 A0A1W2PQM1 296 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LNP1A1A4G5 178 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DRGXA6NNA5 263 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HNRNPCL2B2RXH8 293 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 KBTBD13C9JR72 458 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ADM5C9JUS6 153 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ATP2A1O14983 1001 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ANGPT2O15123 496 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 POLR3GO15318 223 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 SLC16A3O15427 465 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 CLDN3O15551 220 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TTI1O43156 1089 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PAPSS1O43252 624 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 NUDT21O43809 227 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 MED24O75448 989 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 AKAP3O75969 853 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 RSL1D1O76021 490 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 DDAH2O95865 285 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 GAS8O95995 478 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 C1RP00736 705 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ADAP00813 363 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM86B2P0C5J1 330 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 OR52Z1P0C646 297 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SLURP2P0DP57 97 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 VSIG8P0DPA2 414 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CALCBP10092 127 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TFPIP10646 304 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 THRBP10828 461 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HSPA8P11142 646 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 EPB41P11171 864 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 TNNI3P19429 210 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TACR2P21452 398 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms