RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RXRGP48443 463 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 SPINT3P49223 89 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 NXPH1P58417 271 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 DCDC1P59894 354 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 GRIK2Q13002 908 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ACOX1Q15067 660 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 IRF4Q15306 451 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 SF3A2Q15428 464 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 CCDC6Q16204 474 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 PNCKQ6P2M8 343 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 DBX2Q6ZNG2 339 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 GSTA5Q7RTV2 222 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ZNF572Q7Z3I7 529 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 KDELC2Q7Z4H8 507 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 SPATS2Q86XZ4 545 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 CCHCR1Q8TD31 782 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 BRSK1Q8TDC3 778 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 NUS1Q96E22 293 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 TBL1YQ9BQ87 522 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ABCG8Q9H221 673 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 SMOC1Q9H4F8 434 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 FZD3Q9NPG1 666 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 RAB6BQ9NRW1 208 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 RAD18Q9NS91 495 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 PKD2L2Q9NZM6 624 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ANKRD6Q9Y2G4 727 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 GOLGA4Q13439 2230 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 A0A0U1RQS6 177 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 SPTY2D1-AS1A0A0U1RR47 76 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 A0A1B0GVT2 93 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 F5H423 210 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 GAS8O95995 478 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 KRT14P02533 472 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 PYGLP06737 847 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 THEGLP0DJG4 465 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TSHRP16473 764 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TPSB2P20231 275 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 ETV3P41162 512 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 PTGIRP43119 386 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CLDN2P57739 230 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 ARHGAP8P85298 464 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 PDE1BQ01064 536 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TUBB2AQ13885 445 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TAF1AQ15573 450 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TPSAB1Q15661 275 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 KIF19Q2TAC6 998 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 HENMT1Q5T8I9 393 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 ARMC3Q5W041 872 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TCEAL6Q6IPX3 200 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 Q6ZSR6 202 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 SYDE1Q6ZW31 735 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 PRUNE1Q86TP1 453 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 OXR1Q8N573 874 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 SLC25A41Q8N5S1 370 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 OR13H1Q8NG92 308 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TCEAL3Q969E4 200 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CAPZA3Q96KX2 299 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 C16orf45Q96MC5 204 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 PLEKHG4BQ96PX9 1271 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 APOOQ9BUR5 198 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TUBB2BQ9BVA1 445 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 TEX101Q9BY14 249 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 DDX47Q9H0S4 455 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CASS4Q9NQ75 786 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CDC23Q9UJX2 597 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CA5BQ9Y2D0 317 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 SNX11Q9Y5W9 270 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 BPTFQ12830 3046 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 CEP250Q9BV73 2442 aa9.61□□□□□ -0.87
RABGGTA-221ENST00000561055 AP3B1O00203 1094 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 AURKAO14965 403 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 ECEL1O95672 775 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 CRTAMO95727 393 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 CER1O95813 267 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 SOD1P00441 154 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 PIRTP0C851 137 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 LPOP22079 712 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 C21orf59P57076 290 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 KIAA1024LP59773 190 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 CDH17Q12864 832 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 SLC14A1Q13336 389 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 OLIG2Q13516 323 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 PTK6Q13882 451 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 PTK2BQ14289 1009 aa9.6□□□□□ -0.87
RABGGTA-221ENST00000561055 INPP5AQ14642 412 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms