RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ETV3P41162 512 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 POU4F1Q01851 419 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CALCOCO2Q13137 446 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 TRIP10Q15642 601 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 TIGD2Q4W5G0 525 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC39A12Q504Y0 691 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 OGFRL1Q5TC84 451 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 SAMD5Q5TGI4 173 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RSPO2Q6UXX9 243 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 SMIM5Q71RC9 77 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 GAREM2Q75VX8 874 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC25A41Q8N5S1 370 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 PRELID2Q8N945 189 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ETNPPLQ8TBG4 499 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ISL2Q96A47 359 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 MFSD14AQ96MC6 490 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 GDF15Q99988 308 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 PSD2Q9BQI7 771 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RIOK1Q9BRS2 568 aaKnown RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 THTPAQ9BU02 230 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RNF26Q9BY78 433 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FOXP3Q9BZS1 431 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 IMPG2Q9BZV3 1241 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 B3GNT4Q9C0J1 378 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CHST8Q9H2A9 424 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 C10orf88Q9H8K7 445 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 MAGEF1Q9HAY2 307 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FBXO6Q9NRD1 293 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RIC8BQ9NVN3 520 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 HCFC1R1Q9NWW0 138 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 GPRC5DQ9NZD1 345 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 MRPL15Q9P015 296 aaKnown RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 MID2Q9UJV3 735 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CDH7Q9ULB5 785 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 KCNK7Q9Y2U2 307 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 B3GALT1Q9Y5Z6 326 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ISM1B1AKI9 464 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF701M0R085 212 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CRYZL1O95825 349 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 F9P00740 461 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 H2AFZP0C0S5 128 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FAM157BP0CG42 384 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FCER1AP12319 257 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ANXA13P27216 316 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 HIBADHP31937 336 aaKnown RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF41P51814 821 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CYP2A13Q16696 494 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF484Q5JVG2 852 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 EFHC1Q5JVL4 640 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FAM182BQ5T319 152 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 GARNL3Q5VVW2 1013 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 BTBD8Q5XKL5 378 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 TTC27Q6P3X3 843 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FAM111BQ6SJ93 734 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 H2AFVQ71UI9 128 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF571Q7Z3V5 609 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 FAM83AQ86UY5 434 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 METTL23Q86XA0 190 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 MIGA1Q8NAN2 632 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 EXD1Q8NHP7 514 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RAB3IL1Q8TBN0 382 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CFHR4Q92496 578 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 UHRF1Q96T88 793 aaPredicted RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC77Q9BR77 488 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 ACPTQ9BZG2 426 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CCSER1Q9C0I3 900 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 CRLF2Q9HC73 371 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 APPL1Q9UKG1 709 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 NENFQ9UMX5 172 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 RUVBL1Q9Y265 456 aaKnown RBP6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 EP400Q96L91 3159 aa6.76□□□□□ -1.33
TSPAN3-209ENST00000560715 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 A8MVJ9 347 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 ZBTB14O43829 449 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 RNGTTO60942 597 aaKnown RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 TSPAN9O75954 239 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 PRKCBP05771 671 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 TYRP14679 529 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 EN2P19622 333 aaPredicted RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 CPA2P48052 419 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 THOP1P52888 689 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 KRT76Q01546 638 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 GPR162Q16538 588 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF628Q5EBL2 1059 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 RHBDF2Q6PJF5 856 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC137Q6PK04 289 aaKnown RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 PET117Q6UWS5 81 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 C4orf22Q6V702 233 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 KCTD20Q7Z5Y7 419 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC28AQ8IWP9 274 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC15A4Q8N697 577 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 FBXO30Q8TB52 745 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 TAMM41Q96BW9 452 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms