RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CCT8P50990 548 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 STC1P52823 247 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PDE1BQ01064 536 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ACOX1Q15067 660 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SLC1A5Q15758 541 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PCSK7Q16549 785 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 CYP1B1Q16678 543 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 WSCD2Q2TBF2 565 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 STPG1Q5TH74 334 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 LINC00523Q86TU6 105 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ATG4AQ8WYN0 398 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 KLK6Q92876 244 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 NUS1Q96E22 293 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 OXNAD1Q96HP4 312 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 MRGPRX2Q96LB1 330 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 TBATAQ96M53 351 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 RTKNQ9BST9 563 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SMOC1Q9H4F8 434 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ZFYVE1Q9HBF4 777 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ARFGAP3Q9NP61 516 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SPTY2D1-AS1A0A0U1RR47 76 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 CCDC188H7C350 402 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 AP3B1O00203 1094 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SLC30A4O14863 429 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 WNT1P04628 370 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PRKCGP05129 697 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 ALPIP09923 528 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 HMGCLP35914 325 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 TRIM23P36406 574 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 FNTAP49354 379 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 THOP1P52888 689 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 GDF10P55107 478 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 DCDC1P59894 354 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PTSQ03393 145 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 IRF4Q15306 451 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 HLA-BQ31612 363 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 RANBP10Q6VN20 620 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 CCNI2Q6ZMN8 369 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 Q6ZSR6 202 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PTAR1Q7Z6K3 402 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 TECPR1Q7Z6L1 1165 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 PARGQ86W56 976 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 IPMKQ8NFU5 416 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 GRK7Q8WTQ7 553 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 BMFQ96LC9 184 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 RUNDC3BQ96NL0 473 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 GTPBP2Q9BX10 602 aaKnown RBP13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 GAREM1Q9H706 876 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 FZD3Q9NPG1 666 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 UBP1Q9NZI7 540 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SNX11Q9Y5W9 270 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 SLCO1B1Q9Y6L6 691 aa13.98□□□□□ -0.17
PKNOX1-209ENST00000560448 A0A1B0GTQ1 180 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 POM121BA6NF01 834 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 RAD51BO15315 384 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 ERLIN1O75477 346 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 AP2A1O95782 977 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 IFNB1P01574 187 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 ATXN1LP0C7T5 689 aaKnown RBP13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 CTPS1P17812 591 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 TNFRSF8P28908 595 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 IGFALSP35858 605 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 BLKP51451 505 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 KIAA1024LP59773 190 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 GALNT3Q14435 633 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 CDKN3Q16667 212 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 PDPK2PQ6A1A2 396 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 C8orf74Q6P047 294 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 PNCKQ6P2M8 343 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 MACC1Q6ZN28 852 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 GSTA5Q7RTV2 222 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 PRELID2Q8N945 189 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 OR13H1Q8NG92 308 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 BTN2A2Q8WVV5 523 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 KRT12Q99456 494 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 FUT8Q9BYC5 575 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 C10orf88Q9H8K7 445 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 ZNF711Q9Y462 761 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
PKNOX1-209ENST00000560448 DOCK9Q9BZ29 2069 aa13.96□□□□□ -0.17
PKNOX1-209ENST00000560448 H3BM21 787 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 CACNB4O00305 520 aaPredicted RBP13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 FLRT2O43155 660 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 GM2AP17900 193 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 ADRA1AP35348 466 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 SPINT3P49223 89 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 CLDN2P57739 230 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 HNRNPKP61978 463 aaKnown RBP eCLIP13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 MRPS25P82663 173 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms