RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CCNYQ8ND76 341 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 GPR156Q8NFN8 814 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CCHCR1Q8TD31 782 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 FAF2Q96CS3 445 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 HIC2Q96JB3 615 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
TPM1-223ENST00000560445 CARS2Q9HA77 564 aaKnown RBP14.07□□□□□ -0.16
TPM1-223ENST00000560445 ABHD10Q9NUJ1 306 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 DDX56Q9NY93 547 aaKnown RBP14.07□□□□□ -0.16
TPM1-223ENST00000560445 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 SATB2Q9UPW6 733 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 ENTPD2Q9Y5L3 495 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 RP1P56715 2156 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 A0A0J9YYE9 177 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 LRRD1A4D1F6 860 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 RGSL1A5PLK6 1076 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 NPIPB15A6NHN6 443 aaPredicted RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 A8MX80 341 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 TK2O00142 265 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 NTN3O00634 580 aaPredicted RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 TRBC1P01850 177 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 RPLP0P05388 317 aaKnown RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 IVLP07476 585 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 IL4RP24394 825 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 CCKBRP32239 447 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 ETV3P41162 512 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 TNNT3P45378 269 aaPredicted RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 ARSEP51690 589 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 INHBCP55103 352 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 CDK3Q00526 305 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 MMRN1Q13201 1228 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 PDK1Q15118 436 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 OGFOD3Q6PK18 319 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 VSTM4Q8IW00 320 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 TP53INP2Q8IXH6 220 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 AP2M1Q96CW1 435 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 ATXN7L3BQ96GX2 97 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 FCRL3Q96P31 734 aaPredicted RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 DPYSL5Q9BPU6 564 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 TDRD1Q9BXT4 1180 aaKnown RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 LRRN3Q9H3W5 708 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 RAD18Q9NS91 495 aa14.06□□□□□ -0.16
TPM1-223ENST00000560445 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 PNMA8BQ9ULN7 279 aaPredicted RBP14.06□□□□□ -0.16
TPM1-223ENST00000560445 RHPN2P1A8MT19 583 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 B4DGG1 531 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 PLD2O14939 933 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 MFAP3LO75121 409 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 MTA2O94776 668 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 CELA2BP08218 269 aaPredicted RBP14.05□□□□□ -0.16
TPM1-223ENST00000560445 CD48P09326 243 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 TLE3Q04726 772 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 MESDQ14696 234 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 LRRC66Q68CR7 880 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 CCDC70Q6NSX1 233 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 CRTC1Q6UUV9 634 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 Q6ZVL8 140 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 SPACA3Q8IXA5 215 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 AVL9Q8NBF6 648 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 EXD1Q8NHP7 514 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 GPBAR1Q8TDU6 330 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 PIH1D2Q8WWB5 315 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 SLC46A1Q96NT5 459 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 FRMD8Q9BZ67 464 aaPredicted RBP14.05□□□□□ -0.16
TPM1-223ENST00000560445 PRORYQ9H606 182 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 STN1Q9H668 368 aaKnown RBP14.05□□□□□ -0.16
TPM1-223ENST00000560445 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 EPB41L5Q9HCM4 733 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 ASCL3Q9NQ33 180 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 RALYQ9UKM9 306 aaKnown RBP14.05□□□□□ -0.16
TPM1-223ENST00000560445 SLC17A4Q9Y2C5 497 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 PCDHGA7Q9Y5G6 932 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 PTPRQQ9UMZ3 2332 aa14.05□□□□□ -0.16
TPM1-223ENST00000560445 APOL1O14791 398 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 MTSS1O43312 755 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 FZD6O60353 706 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 JMJD7P0C870 316 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 SLC2A4P14672 509 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 LHCGRP22888 699 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 KDELR1P24390 212 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 GPR3P46089 330 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 GNPDA1P46926 289 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 RHDQ02161 417 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 PPIDQ08752 370 aaKnown RBP14.04□□□□□ -0.16
TPM1-223ENST00000560445 TFDP2Q14188 446 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 SLC14A2Q15849 920 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 ASTE1Q2TB18 679 aaPredicted RBP14.04□□□□□ -0.16
TPM1-223ENST00000560445 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 RAB11FIP2Q7L804 512 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 HSD11B1LQ7Z5J1 315 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 CLEC14AQ86T13 490 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 GALNT13Q8IUC8 556 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 RHOT1Q8IXI2 618 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 CBARPQ8N350 705 aaPredicted RBP14.04□□□□□ -0.16
TPM1-223ENST00000560445 FBXO39Q8N4B4 442 aa14.04□□□□□ -0.16
TPM1-223ENST00000560445 SLC35G2Q8TBE7 412 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms