RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TMEM74Q96NL1 305 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF599Q96NL3 588 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 GFM1Q96RP9 751 aaKnown RBP13.62□□□□□ -0.23
SMAD3-214ENST00000560402 STRADBQ9C0K7 418 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 GPATCH2LQ9NWQ4 482 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 KCTD5Q9NXV2 234 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CTTNBP2NLQ9P2B4 639 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 GULP1Q9UBP9 304 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 AMFRQ9UKV5 643 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 GPR34Q9UPC5 381 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 SCINQ9Y6U3 715 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 CFAP46Q8IYW2 2715 aa13.62□□□□□ -0.23
SMAD3-214ENST00000560402 TNFRSF10CO14798 259 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 BUB1BO60566 1050 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-214ENST00000560402 SOCS5O75159 536 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 FTLP02792 175 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-214ENST00000560402 PNLIPP16233 465 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 ERCC2P18074 760 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 NFKBIAP25963 317 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 CCKBRP32239 447 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 HCAR3P49019 387 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 INHBCP55103 352 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 RALGDSQ12967 914 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 BRD3Q15059 726 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 ARHGAP40Q5TG30 622 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 TMCO3Q6UWJ1 677 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 CAMK1DQ8IU85 385 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 ARHGAP12Q8IWW6 846 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
SMAD3-214ENST00000560402 GPR156Q8NFN8 814 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 OR56A4Q8NGH8 313 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 PDXPQ96GD0 296 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 KCTD15Q96SI1 283 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-214ENST00000560402 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 TAS2R14Q9NYV8 317 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 SIRPGQ9P1W8 387 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 SEPT3Q9UH03 358 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 LCMT1Q9UIC8 334 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 ACSL6Q9UKU0 697 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 OR1A2Q9Y585 309 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 PCDHGA7Q9Y5G6 932 aa13.61□□□□□ -0.23
SMAD3-214ENST00000560402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 TMEM191CA6NGB0 347 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 MIF4GDA9UHW6 222 aaKnown RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 K7ENP7 123 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 DFFAO00273 331 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 PDE2AO00408 941 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 PLD2O14939 933 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 TNFSF15O95150 251 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 FTCDO95954 541 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 RGRP47804 291 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 CA9Q16790 459 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 PCSK4Q6UW60 755 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 LIPIQ6XZB0 460 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF572Q7Z3I7 529 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 UBL4BQ8N7F7 174 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 SLC35G2Q8TBE7 412 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 TMEM159Q96B96 161 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF653Q96CK0 615 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 PSKH2Q96QS6 385 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 NAP1L3Q99457 506 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 TLR10Q9BXR5 811 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 WDR26Q9H7D7 661 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 ZWILCHQ9H900 591 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 APPL1Q9UKG1 709 aa13.6□□□□□ -0.23
SMAD3-214ENST00000560402 ARHGEF17Q96PE2 2063 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-214ENST00000560402 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 H3BRJ5 948 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 TRAFD1O14545 582 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 LRCH4O75427 683 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 MTA2O94776 668 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 RPLP0P05388 317 aaKnown RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 GLB1P16278 677 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 MIPP30301 263 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 PCK1P35558 622 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 TRIM23P36406 574 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF235Q14590 738 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 LBRQ14739 615 aaKnown RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 PPP6R3Q5H9R7 873 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 RALGPS1Q5JS13 557 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 CERCAMQ5T4B2 595 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 CYP4V2Q6ZWL3 525 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-214ENST00000560402 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 RD3Q7Z3Z2 195 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 ZNF605Q86T29 641 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 CCNJLQ8IV13 435 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
SMAD3-214ENST00000560402 FBXO39Q8N4B4 442 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms