RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TXNDC11Q6PKC3 985 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM207Q6UWW9 146 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TAS1R1Q7RTX1 841 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 EFL1Q7Z2Z2 1120 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ISCA2Q86U28 154 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 HPS6Q86YV9 775 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 RNF135Q8IUD6 432 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 KBTBD2Q8IY47 623 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 CLYBLQ8N0X4 340 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PLCD3Q8N3E9 789 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 OR13C4Q8NGS5 318 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF461Q8TAF7 563 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 RIN3Q8TB24 985 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 SLC26A7Q8TE54 656 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 LPGAT1Q92604 370 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 USP13Q92995 863 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 KIAA1191Q96A73 305 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 SGF29Q96ES7 293 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 IGSF21Q96ID5 467 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 PRICKLE1Q96MT3 831 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ATOH8Q96SQ7 321 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 SLC25A23Q9BV35 468 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 C1QTNF3Q9BXJ4 246 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ERVK-6Q9BXR3 956 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ADGRE3Q9BY15 652 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 MRPL1Q9BYD6 325 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 SHCBP1LQ9BZQ2 653 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 CCDC68Q9H2F9 335 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ALG9Q9H6U8 611 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 WDR41Q9HAD4 459 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 SPATS2LQ9NUQ6 558 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 TAS2R13Q9NYV9 303 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 C6orf203Q9P0P8 240 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 AGO1Q9UL18 857 aaKnown RBP8.08□□□□□ -1.12
SMAD3-212ENST00000559937 ARL5AQ9Y689 179 aa8.08□□□□□ -1.12
SMAD3-212ENST00000559937 A0A0D9SEW6 157 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CXorf51AA0A1B0GTR3 108 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TTC24A2A3L6 582 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 OR51F1A6NGY5 319 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SYCE1LA8MT33 242 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM233B4DJY2 109 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 NT5C1B-RDH14C9J2C7 533 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 H3BNX3 289 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 STX16-NPEPL1H3BU86 382 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PSMD12O00232 456 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 STX16O14662 325 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 ADAM12O43184 909 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 KERAO60938 352 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 VPS4BO75351 444 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 GPC4O75487 556 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 NDUFS3O75489 264 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 ZMPSTE24O75844 475 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 BCAS2O75934 225 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SUPT7LO94864 414 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 BAG2O95816 211 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 F11P03951 625 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SOD2P04179 222 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PIM1P11309 404 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 HNRNPLP14866 589 aaKnown RBP eCLIP8.07□□□□□ -1.126e-9■■□□□ 12.3
SMAD3-212ENST00000559937 PMLP29590 882 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CORO1AP31146 461 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 ALDH1A3P47895 512 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TTPAP49638 278 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 THOP1P52888 689 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 ADARP55265 1226 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 RPS24P62847 133 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 RAD51Q06609 339 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TRAP1Q12931 704 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 FASTKQ14296 549 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 GALNT3Q14435 633 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SEMA3AQ14563 771 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CYTH1Q15438 398 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TCTN1Q2MV58 587 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SPATS1Q496A3 300 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PABPC1LQ4VXU2 614 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 IRAK1BP1Q5VVH5 260 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM198Q66K66 360 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CAPRIN2Q6IMN6 1127 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CXorf57Q6NSI4 855 aaKnown RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 IZUMO2Q6UXV1 221 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 LARP4Q71RC2 724 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 GLT6D1Q7Z4J2 308 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM173Q86WV6 379 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PDSS2Q86YH6 399 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 DENND1CQ8IV53 801 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CFAP52Q8N1V2 620 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 STK40Q8N2I9 435 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 SPATA6LQ8N4H0 392 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TTC30BQ8N4P2 665 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 CHCHD4Q8N4Q1 142 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 HJURPQ8NCD3 748 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-212ENST00000559937 STAG3L4Q8TBR4 150 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PIP4K2CQ8TBX8 421 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 TSPEARQ8WU66 669 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 GATA6Q92908 595 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 PTERQ96BW5 349 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 ROPN1LQ96C74 230 aa8.07□□□□□ -1.12
SMAD3-212ENST00000559937 RMDN1Q96DB5 314 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms