RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SLC7A2P52569 658 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 HERVK_113P63132 956 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 YBX1P67809 324 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 MYBPC1Q00872 1141 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 MAPRE2Q15555 327 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 GEN1Q17RS7 908 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 KIF19Q2TAC6 998 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 C6orf10Q5SRN2 563 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 IYDQ6PHW0 289 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SLC24A5Q71RS6 500 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 GALNT7Q86SF2 657 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SAPCD2Q86UD0 394 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 ADCY4Q8NFM4 1077 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 CATSPERZQ9NTU4 200 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 IL37Q9NZH6 218 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 SUCOQ9UBS9 1254 aaKnown RBP10.04□□□□□ -0.8
LRRC28-216ENST00000559819 CROTQ9UKG9 612 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 FAM50BQ9Y247 325 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 DNAJC15Q9Y5T4 150 aa10.04□□□□□ -0.8
LRRC28-216ENST00000559819 A0A0U1RQS6 177 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 MTMR11A4FU01 709 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 SLC10A3P09131 477 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 CHRM1P11229 460 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 MTHFD2P13995 350 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ZNF37AP17032 561 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 GPX3P22352 226 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 FMO4P31512 558 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 SLC6A4P31645 630 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 CDKN1CP49918 316 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 RPL26P61254 145 aaKnown RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ECT2LQ008S8 904 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ACVR1Q04771 509 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 PTPRRQ15256 657 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 PARP15Q460N3 678 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 OR4L1Q8NH43 312 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 CYP2S1Q96SQ9 504 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TRIM8Q9BZR9 551 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 PDFQ9HBH1 243 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TLR8Q9NR97 1041 aaKnown RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 GALPQ9UBC7 116 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 SARDHQ9UL12 918 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 RAB26Q9ULW5 256 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 AP4S1Q9Y587 144 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ZNF839A8K0R7 811 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 IGLV3-27P01718 113 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 FGF1P05230 155 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 RPLP2P05387 115 aaKnown RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 NKX3-2P78367 333 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ROR2Q01974 943 aaKnown RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TNK2Q07912 1038 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 DUSP4Q13115 394 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 MTX3Q5HYI7 312 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 AMIGO2Q86SJ2 522 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 CLYBLQ8N0X4 340 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 FEM1CQ96JP0 617 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 AARSD1Q9BTE6 412 aaKnown RBP10.03□□□□□ -0.8
LRRC28-216ENST00000559819 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 TUBB1Q9H4B7 451 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 COQ10BQ9H8M1 238 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 SPAG4Q9NPE6 437 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 CD300AQ9UGN4 299 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 LZTS1Q9Y250 596 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 VWA8A3KMH1 1905 aa10.03□□□□□ -0.8
LRRC28-216ENST00000559819 FAM92AA1XBS5 289 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 C7orf72A4D263 438 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NCF1BA6NI72 391 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NCF1CA8MVU1 366 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SUPT3HB4E1H0 165 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TLR5O60602 858 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SUPT3HO75486 399 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 RHOBTB1O94844 696 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 EOMESO95936 686 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 C8BP07358 591 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 LINC00032P0C843 101 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 PABPC4LP0CB38 370 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 GFAPP14136 432 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NCF1P14598 390 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ATP6V1B1P15313 513 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF26P17031 533 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NELFEP18615 380 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 HLA-DPA1P20036 260 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CHRM3P20309 590 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 HOXD9P28356 352 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 MAGEA11P43364 429 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 PSMD8P48556 350 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NFKB2Q00653 900 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 GALNT1Q10472 559 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 VPS26BQ4G0F5 336 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SETMARQ53H47 684 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 HMBOX1Q6NT76 420 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 MRNIPQ6NTE8 343 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 PAQR3Q6TCH7 311 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 METTL25Q8N6Q8 603 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms