RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 OAZ3Q9UMX2 235 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 PCDHGB4Q9UN71 923 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 BCORQ6W2J9 1755 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 RNASEH2AO75792 299 aaKnown RBP7.12□□□□□ -1.27
USP3-210ENST00000559192 IL6P05231 212 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 XPAP23025 273 aaPredicted RBP7.12□□□□□ -1.27
USP3-210ENST00000559192 SOAT1P35610 550 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 CDK18Q07002 472 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 SOWAHAQ2M3V2 549 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 NAPRTQ6XQN6 538 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 KRT74Q7RTS7 529 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 KRT77Q7Z794 578 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 UNC93AQ86WB7 457 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 CLYBLQ8N0X4 340 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 GALNT6Q8NCL4 622 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 OR9I1Q8NGQ6 314 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 TMIGD2Q96BF3 282 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 HOPXQ9BPY8 73 aaPredicted RBP7.12□□□□□ -1.27
USP3-210ENST00000559192 PDCD10Q9BUL8 212 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 NIFKQ9BYG3 293 aaKnown RBP7.12□□□□□ -1.27
USP3-210ENST00000559192 RHOBTB2Q9BYZ6 727 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 ALG2Q9H553 416 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 ZBTB26Q9HCK0 441 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 VTA1Q9NP79 307 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 ZNF224Q9NZL3 707 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 RABL2BQ9UNT1 228 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 WBP11Q9Y2W2 641 aaKnown RBP7.12□□□□□ -1.27
USP3-210ENST00000559192 TAF1P21675 1872 aa7.12□□□□□ -1.27
USP3-210ENST00000559192 ARPC4-TTLL3A0A0A6YYG9 625 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 BBIP1A8MTZ0 92 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 BHMG1C9JSJ3 638 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 H3BMM5 538 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 FFAR3O14843 346 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 GPR42O15529 346 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 BCAS2O75934 225 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 B3GAT3O94766 335 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PENKP01210 267 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 DHRS4L1P0CG22 281 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 LMO2P25791 158 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SLC7A1P30825 629 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SLC1A2P43004 574 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 NOVP48745 357 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 MYBPC3Q14896 1274 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 KHDRBS2Q5VWX1 349 aaKnown RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 HDAC10Q969S8 669 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 CENPNQ96H22 339 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 TRIM54Q9BYV2 358 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 USP29Q9HBJ7 922 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 GBA2Q9HCG7 927 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 ZFP14Q9HCL3 533 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PCDH12Q9NPG4 1184 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 LMCD1Q9NZU5 365 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 BAIAP2Q9UQB8 552 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 POLR3HQ9Y535 204 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 HEMK1Q9Y5R4 338 aaPredicted RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 SNX8Q9Y5X2 465 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 RAD54BQ9Y620 910 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 LAMB1P07942 1786 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 NPEPPSL1A6NEC2 478 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 MATN2O00339 956 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PIP5K1BO14986 540 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 NPM3O75607 178 aaKnown RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 SPATA31D3P0C874 917 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 HDCP19113 662 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 CHRNA4P43681 627 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 RGS4P49798 205 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 ENPEPQ07075 957 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 FSCN1Q16658 493 aaKnown RBP7.11□□□□□ -1.27
USP3-210ENST00000559192 ZBED5Q49AG3 693 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PGBD2Q6P3X8 592 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SPATA31D4Q6ZUB0 917 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SMYD1Q8NB12 490 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 RNFT2Q96EX2 444 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SMARCD1Q96GM5 515 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PPM1MQ96MI6 270 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 KLHL5Q96PQ7 755 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 TAS2R13Q9NYV9 303 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 LRFN2Q9ULH4 789 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 A0A1W2PPW3 197 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 GNB5O14775 395 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 AXIN1O15169 862 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 SLC22A3O75751 556 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 IDO1P14902 403 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 LHX1P48742 406 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 ZNF132P52740 706 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 OLR1P78380 273 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 DPYSL2Q16555 572 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 PPP1R3AQ16821 1122 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 ZNF284Q2VY69 593 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 TTC23Q5W5X9 447 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 GLYATQ6IB77 296 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 CNSTQ6PJW8 725 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 UGT2A3Q6UWM9 527 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 TIFABQ6ZNK6 161 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 GLT6D1Q7Z4J2 308 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 ATP6V0D2Q8N8Y2 350 aa7.11□□□□□ -1.27
USP3-210ENST00000559192 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms