RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 PLAAQ9Y263 795 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 NCKAP1Q9Y2A7 1128 aa18.06■□□□□ 0.48
CLPX-203ENST00000558958 TECTAO75443 2155 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 FAM159BA6NKW6 160 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 H7C0S8 307 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PSMD11O00231 422 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PLRG1O43660 514 aaKnown RBP18.05■□□□□ 0.48
CLPX-203ENST00000558958 PI15O43692 258 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 ERVK-10P10266 1014 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 BPIP17213 487 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 SPINT3P49223 89 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 TPMTP51580 245 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PRAMEP78395 509 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 MGAT5Q09328 741 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 KBTBD12Q3ZCT8 623 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 ANO7Q6IWH7 933 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 MAMSTRQ6ZN01 415 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 KCNMB4Q86W47 210 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PGBD3Q8N328 593 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 OR6P1Q8NGX9 317 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 CYTH2Q99418 400 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PPANQ9NQ55 473 aaKnown RBP18.05■□□□□ 0.48
CLPX-203ENST00000558958 ITM2CQ9NQX7 267 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 PKD2L2Q9NZM6 624 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 USP36Q9P275 1121 aaKnown RBP18.05■□□□□ 0.48
CLPX-203ENST00000558958 BCCIPQ9P287 314 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLPX-203ENST00000558958 FKBPLQ9UIM3 349 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 NFS1Q9Y697 457 aa18.05■□□□□ 0.48
CLPX-203ENST00000558958 MUC3AQ02505 3323 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 CCDC162PA2VCL2 907 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 GM2AP17900 193 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 AOC1P19801 751 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 ADPRHP54922 357 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 XIAPP98170 497 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 STAT4Q14765 748 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
CLPX-203ENST00000558958 HSP90AA5PQ58FG0 334 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 ALS2CLQ60I27 953 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 RFLNAQ6ZTI6 216 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 TECPR1Q7Z6L1 1165 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 RASSF3Q86WH2 238 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 RAVER1Q8IY67 606 aaKnown RBP18.04■□□□□ 0.48
CLPX-203ENST00000558958 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 SGSM3Q96HU1 749 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 COQ10AQ96MF6 247 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 VIPAS39Q9H9C1 493 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 IL26Q9NPH9 171 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 CD93Q9NPY3 652 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 SMYD2Q9NRG4 433 aa18.04■□□□□ 0.48
CLPX-203ENST00000558958 RGSL1A5PLK6 1076 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 TMEM221A6NGB7 291 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 CXorf49A8MYA2 514 aaPredicted RBP18.03■□□□□ 0.48
CLPX-203ENST00000558958 GOLGA8KD6RF30 607 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 GOLGA8TH3BQL2 631 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 M0R296 226 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 MAP2K7O14733 419 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 MMP20O60882 483 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 PIAS1O75925 651 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 APBB3O95704 486 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 GOT2P00505 430 aaKnown RBP18.03■□□□□ 0.48
CLPX-203ENST00000558958 IGLV3-19P01714 112 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 PTPN5P54829 565 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 CREB5Q02930 508 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 PEX6Q13608 980 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 EFTUD2Q15029 972 aaKnown RBP eCLIP18.03■□□□□ 0.488e-6■■□□□ 13.1
CLPX-203ENST00000558958 KLHL38Q2WGJ6 581 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 ZDHHC20Q5W0Z9 365 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 NEPROQ6NW34 567 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 AFTPHQ6ULP2 937 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 Q6ZVL8 140 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 MICALCLQ6ZW33 695 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 GPR26Q8NDV2 337 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 OR4L1Q8NH43 312 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 OR14C36Q8NHC7 312 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 CXorf40AQ8TE69 158 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 ZIM3Q96PE6 472 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 PLEKHG4BQ96PX9 1271 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 CCDC77Q9BR77 488 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 KDM4CQ9H3R0 1056 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 TTC28Q96AY4 2481 aa18.03■□□□□ 0.48
CLPX-203ENST00000558958 SCN8AQ9UQD0 1980 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 EXOC1LA0A1B0GW35 172 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 OR51F1A6NGY5 319 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 GAPDHSO14556 408 aaPredicted RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 WNT9AO14904 365 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 TCEA3O75764 348 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 PCDH8O95206 1070 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 C6P13671 934 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 SPAM1P38567 509 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 ETV3P41162 512 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CXCL12P48061 93 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CLCN5P51795 746 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 EIF3BP55884 814 aaKnown RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 DCDC1P59894 354 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 THOC5Q13769 683 aaKnown RBP18.02■□□□□ 0.48
CLPX-203ENST00000558958 ACOX1Q15067 660 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 TEDDM1Q5T9Z0 273 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 LRIG3Q6UXM1 1119 aa18.02■□□□□ 0.48
CLPX-203ENST00000558958 CYP2U1Q7Z449 544 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms