RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PCCBP05166 539 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 MLNP12872 115 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 HMGCLP35914 325 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 NBL1P41271 181 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 CLDN2P57739 230 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 GUCY2DQ02846 1103 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 PTPRCAPQ14761 206 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 STAT4Q14765 748 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 ALS2CLQ60I27 953 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 NRSN1Q8IZ57 195 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 DENND6BQ8NEG7 585 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 CENPTQ96BT3 561 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 LOXL4Q96JB6 756 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 KLF6Q99612 283 aaPredicted RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 ABCG8Q9H221 673 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 SEMA4AQ9H3S1 761 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 MBNL1Q9NR56 388 aaKnown RBP21.23■□□□□ 0.99
CASC4-204ENST00000557945 KCTD5Q9NXV2 234 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 IL17CQ9P0M4 197 aa21.23■□□□□ 0.99
CASC4-204ENST00000557945 DOCK9Q9BZ29 2069 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 CCDC78A2IDD5 438 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 HEATR9A2RTY3 570 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 RGSL1A5PLK6 1076 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 SMAPO00193 183 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 FPGTO14772 594 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 LDB2O43679 373 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 GNSP15586 552 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 ADRA1DP25100 572 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 CRADDP78560 199 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 PDE1BQ01064 536 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 LAMB3Q13751 1172 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 AGERQ15109 404 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 IRF4Q15306 451 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 LAIR1Q6GTX8 287 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 SYT12Q8IV01 421 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 RAVER1Q8IY67 606 aaKnown RBP21.22■□□□□ 0.99
CASC4-204ENST00000557945 SUMF1Q8NBK3 374 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 TP53I13Q8NBR0 393 aaPredicted RBP21.22■□□□□ 0.99
CASC4-204ENST00000557945 PPHLN1Q8NEY8 458 aaKnown RBP21.22■□□□□ 0.99
CASC4-204ENST00000557945 OR4K2Q8NGD2 314 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 SCAMP4Q969E2 229 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 AP2M1Q96CW1 435 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 IL22Q9GZX6 179 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 FAM83DQ9H4H8 585 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 TM9SF3Q9HD45 589 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 RAPGEFL1Q9UHV5 662 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 PILRBQ9UKJ0 227 aa21.22■□□□□ 0.99
CASC4-204ENST00000557945 LRRK1Q38SD2 2015 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 ESYT3A0FGR9 886 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 BCAT2O15382 392 aaPredicted RBP21.21■□□□□ 0.99
CASC4-204ENST00000557945 EPN2O95208 641 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 BPIP17213 487 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 IGFALSP35858 605 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 DPP6P42658 865 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 RACK1P63244 317 aaKnown RBP21.21■□□□□ 0.99
CASC4-204ENST00000557945 TMPRSS15P98073 1019 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 TRADDQ15628 312 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 CASC4Q6P4E1 433 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 RIOK2Q9BVS4 552 aaKnown RBP21.21■□□□□ 0.99
CASC4-204ENST00000557945 EPB41L5Q9HCM4 733 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 RAD18Q9NS91 495 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 TMEM74BQ9NUR3 256 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 SYBUQ9NX95 663 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 GRHL1Q9NZI5 618 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 SUSD2Q9UGT4 822 aa21.21■□□□□ 0.99
CASC4-204ENST00000557945 DMGDHQ9UI17 866 aaKnown RBP21.21■□□□□ 0.99
CASC4-204ENST00000557945 H0Y8X5 98 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 RHOXF2BP0C7M4 288 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 ZNF140P52738 457 aaPredicted RBP21.2■□□□□ 0.98
CASC4-204ENST00000557945 DRG2P55039 364 aaKnown RBP21.2■□□□□ 0.98
CASC4-204ENST00000557945 PCID2Q5JVF3 399 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 TEX35Q5T0J7 233 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 RAET1GQ6H3X3 334 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 KDM7AQ6ZMT4 941 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 GCNT7Q6ZNI0 430 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 ZNF765Q7L2R6 523 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 TMEM145Q8NBT3 493 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 PLA2G15Q8NCC3 412 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 GPR26Q8NDV2 337 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 OR13C4Q8NGS5 318 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 C1orf216Q8TAB5 229 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 DNAJC1Q96KC8 554 aaKnown RBP21.2■□□□□ 0.98
CASC4-204ENST00000557945 PWWP2AQ96N64 755 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 RANBP9Q96S59 729 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 RHOXF2Q9BQY4 288 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 FRMD8Q9BZ67 464 aaPredicted RBP21.2■□□□□ 0.98
CASC4-204ENST00000557945 ARRDC1-AS1Q9H2J1 176 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 GMEB2Q9UKD1 530 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 TCAF1Q9Y4C2 921 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 HS3ST3A1Q9Y663 406 aa21.2■□□□□ 0.98
CASC4-204ENST00000557945 A0A1B0GTW7 788 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 POM121BA6NF01 834 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 SDR42E2A6NKP2 422 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 PPFIA2O75334 1257 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 SLU7O95391 586 aaKnown RBP21.19■□□□□ 0.98
CASC4-204ENST00000557945 LMNAP02545 664 aaKnown RBP21.19■□□□□ 0.98
CASC4-204ENST00000557945 PLTPP55058 493 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 INPP5AQ14642 412 aa21.19■□□□□ 0.98
CASC4-204ENST00000557945 DNAJC21Q5F1R6 531 aaKnown RBP21.19■□□□□ 0.98
CASC4-204ENST00000557945 FNBP1LQ5T0N5 605 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms