RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RBPJQ06330 500 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 GRIK3Q13003 919 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TRIM29Q14134 588 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PTPRCAPQ14761 206 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PTPRRQ15256 657 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 DLG2Q15700 870 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TAZQ16635 292 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 KBTBD12Q3ZCT8 623 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CDONQ4KMG0 1287 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 C6orf136Q5SQH8 315 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LRIF1Q5T3J3 769 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SHEQ5VZ18 495 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM91A1Q658Y4 838 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 HEPHL1Q6MZM0 1159 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LRRC8EQ6NSJ5 796 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 OLFM4Q6UX06 510 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 VSTM1Q6UX27 236 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 RANBP10Q6VN20 620 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LDB1Q86U70 411 aaPredicted RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 UEVLDQ8IX04 471 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CLYBLQ8N0X4 340 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CADM3Q8N126 398 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 EXD3Q8N9H8 876 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM47BQ8NA70 645 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ZBTB44Q8NCP5 570 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ZNF540Q8NDQ6 660 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 RBM15BQ8NDT2 890 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 CPEB3Q8NE35 698 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 LPCAT1Q8NF37 534 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 OR52N4Q8NGI2 321 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 OR14L1PQ8NHC6 308 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SPATA18Q8TC71 538 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TRPC4APQ8TEL6 797 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 CELF1Q92879 486 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 SYAP1Q96A49 352 aaPredicted RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 FUBP1Q96AE4 644 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM89AQ96GI7 184 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 KAZALD1Q96I82 304 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FBXL20Q96IG2 436 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 NLRP4Q96MN2 994 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SLITRK1Q96PX8 696 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 NEK1Q96PY6 1258 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ZNF347Q96SE7 839 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 RUFY1Q96T51 708 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 MMS19Q96T76 1030 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PARK7Q99497 189 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 MXRA8Q9BRK3 442 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 PIMREGQ9BSJ6 248 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FSD1LQ9BXM9 530 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TMEM206Q9H813 350 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 DNAJC18Q9H819 358 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 LIN28AQ9H9Z2 209 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 EPB41L5Q9HCM4 733 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TUFT1Q9NNX1 390 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 DUSP22Q9NRW4 184 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 IARS2Q9NSE4 1012 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 ARL8BQ9NVJ2 186 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 DCAF16Q9NXF7 216 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 MCM9Q9NXL9 1143 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TAS2R3Q9NYW6 316 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.84□□□□□ -1.79
TDP1-217ENST00000557782 VPS18Q9P253 973 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TRPC4Q9UBN4 977 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 HEY2Q9UBP5 337 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 DNAJB4Q9UDY4 337 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SLC24A2Q9UI40 661 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 TSPYL4Q9UJ04 414 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 HACL1Q9UJ83 578 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 ADAMTS5Q9UNA0 930 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SNX7Q9UNH6 387 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 SLC8A2Q9UPR5 921 aa3.84□□□□□ -1.79
TDP1-217ENST00000557782 RRP15Q9Y3B9 282 aaKnown RBP3.84□□□□□ -1.79
TDP1-217ENST00000557782 FNDC1Q4ZHG4 1894 aaPredicted RBP3.84□□□□□ -1.8
TDP1-217ENST00000557782 RGSL1A5PLK6 1076 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 SLC30A4O14863 429 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 YY2O15391 372 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 MSI1O43347 362 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 LPXNO60711 386 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 MOSPD3O75425 235 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 RSL1D1O76021 490 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 REC8O95072 547 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 KLKB1P03952 638 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 CYP2A6P11509 494 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 PRLRP16471 622 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 JUNBP17275 347 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 ADRA2CP18825 462 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 FPR3P25089 353 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 RYKP34925 604 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 SCNN1GP51170 649 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 NAGLUP54802 743 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 KIAA1024LP59773 190 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 SLC18A2Q05940 514 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 MZT1Q08AG7 82 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 KLF10Q13118 480 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 GALNT3Q14435 633 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 RPS6KA1Q15418 735 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 PROSER3Q2NL68 480 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms