RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 YME1L1Q96TA2 773 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 KCNN2Q9H2S1 579 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GIMAP4Q9NUV9 329 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 RBM28Q9NW13 759 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TBC1D29Q9UFV1 150 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FAM96BQ9Y3D0 163 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 PCSK5Q92824 1860 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 KANSL1LA0AUZ9 987 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DDTLA6NHG4 134 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TIPRLO75663 272 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CSH1P0DML2 217 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CSH2P0DML3 217 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CHRNB1P11230 501 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 NAGAP17050 411 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 UBA1P22314 1058 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HNRNPH1P31943 449 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HARS2P49590 506 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 PRDM2Q13029 1718 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ASTE1Q2TB18 679 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CDONQ4KMG0 1287 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GGNBP1Q5YKI7 109 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF626Q68DY1 528 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 PQLC2Q6ZP29 291 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TPRG1Q6ZUI0 275 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MOB3CQ70IA8 216 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SZRD1Q7Z422 152 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CPLX4Q7Z7G2 160 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CHERPQ8IWX8 916 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TAF4BQ92750 862 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SMARCE1Q969G3 411 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TAAR8Q969N4 342 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CRAMP1Q96RY5 1269 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 C1QTNF5Q9BXJ0 243 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 IFIH1Q9BYX4 1025 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DCLK3Q9C098 648 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SLC6A13Q9NSD5 602 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 WNT16Q9UBV4 365 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 IL17BQ9UHF5 180 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FBXO4Q9UKT5 387 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CAMK2AQ9UQM7 478 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 AAR2Q9Y312 384 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 BRD4O60885 1362 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 PIK3R4Q99570 1358 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 RNF123Q5XPI4 1314 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HSPA12AO43301 675 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 KCNAB3O43448 404 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PPFIA2O75334 1257 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DDNO94850 711 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ETFAP13804 333 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 UGT1A1P22309 533 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 RRM1P23921 792 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 GARSP41250 739 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PPP3CCP48454 512 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HSD17B4P51659 736 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SEC61BP60468 96 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CHAF1BQ13112 559 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DRAP1Q14919 205 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 WTAPQ15007 396 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HAUS3Q68CZ6 603 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HUS1BQ8NHY5 278 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 UCMAQ8WVF2 138 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 LPAR1Q92633 364 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 C1orf74Q96LT6 269 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HARBI1Q96MB7 349 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CMTM3Q96MX0 182 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NCAPGQ9BPX3 1015 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM39BQ9GZU3 492 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CYSLTR2Q9NS75 346 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM30AQ9NV96 361 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SEPT11Q9NVA2 429 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 MTMR10Q9NXD2 777 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SELENONQ9NZV5 590 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CWC15Q9P013 229 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NCAPD3P42695 1498 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ATXN2Q99700 1313 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 OR2A25A4D2G3 310 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM202A6NGA9 273 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FAM25EA8MYX2 175 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 MAP2K7O14733 419 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ASAP2O43150 1006 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SEC31AO94979 1220 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PORP16435 677 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PON1P27169 355 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 POU1F1P28069 291 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 MMP13P45452 471 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SEC61A1P61619 476 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 LMOD3Q0VAK6 560 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 WASHC5Q12768 1159 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 IRF3Q14653 427 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 E2F5Q15329 346 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TDRD12Q587J7 1177 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SPDYCQ5MJ68 293 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 OTUD1Q5VV17 481 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 C9orf47Q6ZRZ4 202 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF367Q7RTV3 350 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TTC39CQ8N584 583 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC89Q8N998 374 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 Q8N9P0 234 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 GJC3Q8NFK1 279 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FAM216AQ8WUB2 273 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms