RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TPM4P67936 248 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 ZBED6P86452 979 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 CDK3Q00526 305 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 FANCCQ00597 558 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 SLC25A11Q02978 314 aaKnown RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 ILF3Q12906 894 aaKnown RBP eCLIP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 KRT81Q14533 505 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 NFKBIBQ15653 356 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 HADHQ16836 314 aaKnown RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 ZSCAN23Q3MJ62 389 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 CCDC122Q5T0U0 273 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 USP45Q70EL2 814 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 TECPR1Q7Z6L1 1165 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 C17orf82Q86X59 251 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 NRROSQ86YC3 692 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 TEX26Q8N6G2 289 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 CPLX3Q8WVH0 158 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 PIH1D2Q8WWB5 315 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 TTC9Q92623 222 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 MCCC1Q96RQ3 725 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 FRMD8Q9BZ67 464 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 NT5MQ9NPB1 228 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 RCOR3Q9P2K3 495 aaPredicted RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 ACSL6Q9UKU0 697 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 LOXL2Q9Y4K0 774 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 HELZ2Q9BYK8 2649 aaKnown RBP15.87■□□□□ 0.13
TUBB3-213ENST00000557262 UNC13CQ8NB66 2214 aa15.87■□□□□ 0.13
TUBB3-213ENST00000557262 A0A087X0T9 212 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 NPIPB15A6NHN6 443 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-213ENST00000557262 ZW10O43264 779 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 FAM228BP0C875 321 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 CES1P23141 567 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 PBX1P40424 430 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
TUBB3-213ENST00000557262 UBASH3AP57075 661 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 DPTQ07507 201 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 ITKQ08881 620 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 MMRN1Q13201 1228 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 PTPRRQ15256 657 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 RAET1GQ6H3X3 334 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 ALKBH5Q6P6C2 394 aaKnown RBP15.86■□□□□ 0.13
TUBB3-213ENST00000557262 TSPAN33Q86UF1 283 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 PIM3Q86V86 326 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 ZDHHC1Q8WTX9 485 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 IQCDQ96DY2 449 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 CMKLR1Q99788 373 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 SEMA3CQ99985 751 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 SUDS3Q9H7L9 328 aaPredicted RBP15.86■□□□□ 0.13
TUBB3-213ENST00000557262 CBX8Q9HC52 389 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 TAAR2Q9P1P5 351 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 PISDQ9UG56 409 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 CAPN11Q9UMQ6 739 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 SUFUQ9UMX1 484 aa15.86■□□□□ 0.13
TUBB3-213ENST00000557262 GOLGA6CA6NDK9 693 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 RHPN2P1A8MT19 583 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 EFSO43281 561 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 FZD6O60353 706 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 PDHA1P08559 390 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 GOLGA6DP0CG33 693 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 CTPS1P17812 591 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 ALDH4A1P30038 563 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 GPR1P46091 355 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 GNPDA1P46926 289 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 POLD2P49005 469 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 ARSEP51690 589 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 PEX6Q13608 980 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 NLRP8Q86W28 1048 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 SLITRK4Q8IW52 837 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 POLR1EQ9GZS1 481 aaKnown RBP15.85■□□□□ 0.13
TUBB3-213ENST00000557262 ABCG8Q9H221 673 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 WDR70Q9NW82 654 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 GOLGA6AQ9NYA3 693 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 SLC17A4Q9Y2C5 497 aa15.85■□□□□ 0.13
TUBB3-213ENST00000557262 LUC7L2Q9Y383 392 aaKnown RBP15.85■□□□□ 0.13
TUBB3-213ENST00000557262 CFAP46Q8IYW2 2715 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 MATN3O15232 486 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 ECEL1O95672 775 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 CPNE6O95741 557 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 IVLP07476 585 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 CD48P09326 243 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 PLA2G2AP14555 144 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 ITIH1P19827 911 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 CCNCP24863 283 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 AK4P27144 223 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 ADCY8P40145 1251 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 GARSP41250 739 aaKnown RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 MAZP56270 477 aaKnown RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 OR1D5P58170 312 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 CTBSQ01459 385 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 PTSQ03393 145 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 GALNT2Q10471 571 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 LY6DQ14210 128 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 PAFAH1B3Q15102 231 aaKnown RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 IFI16Q16666 785 aaKnown RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 CLPPQ16740 277 aaPredicted RBP15.84■□□□□ 0.13
TUBB3-213ENST00000557262 ATP13A4Q4VNC1 1196 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 PHF19Q5T6S3 580 aa15.84■□□□□ 0.13
TUBB3-213ENST00000557262 KIAA1614Q5VZ46 1190 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms