RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF530Q6P9A1 599 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 B3GNT6Q6ZMB0 384 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 C4orf50Q6ZRC1 276 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 MFSD6Q6ZSS7 791 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 TRMT10CQ7L0Y3 403 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PARS2Q7L3T8 475 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ATG9AQ7Z3C6 839 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PEX26Q7Z412 305 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 EXOC3L1Q86VI1 746 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 SPATA24Q86W54 205 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ECHDC2Q86YB7 292 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 TBC1D10CQ8IV04 446 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 CROCCP3Q8IVE0 287 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 MAP7D3Q8IWC1 876 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 METTL13Q8N6R0 699 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 C11orf44Q8N8P7 122 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ERMNQ8TAM6 284 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF398Q8TD17 642 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ARHGEF2Q92974 986 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 SLC35B4Q969S0 331 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 MPP4Q96JB8 637 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 FAM81BQ96LP2 452 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF184Q99676 751 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 TSG101Q99816 390 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 TCHPQ9BT92 498 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.88□□□□□ -1.795e-6■■■■□ 25.3
FOXN3-213ENST00000556916 BRIP1Q9BX63 1249 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 AP1M1Q9BXS5 423 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PITPNM3Q9BZ71 974 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 BRD8Q9H0E9 1235 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 DENND2DQ9H6A0 471 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 CHST12Q9NRB3 414 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 FAM207AQ9NSI2 230 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ZDHHC18Q9NUE0 388 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 UTP6Q9NYH9 597 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 ELOVL5Q9NYP7 299 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 TMOD4Q9NZQ9 345 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 THEGQ9P2T0 379 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 STX18Q9P2W9 335 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 DKK4Q9UBT3 224 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 AMACRQ9UHK6 382 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 HAO1Q9UJM8 370 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PACSIN2Q9UNF0 486 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 DRG1Q9Y295 367 aaKnown RBP3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PCDH11XQ9BZA7 1347 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 DUOX1Q9NRD9 1551 aa3.88□□□□□ -1.79
FOXN3-213ENST00000556916 PXDNQ92626 1479 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CROCCQ5TZA2 2017 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PVALEFA0A1B0GWK0 134 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TMEM120BA0PK00 339 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 ARHGAP10A1A4S6 786 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TMEM247A6NEH6 219 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 SMIM23A6NLE4 172 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TMEM110-MUSTN1A8MSY1 372 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 KCNU1A8MYU2 1149 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PRRT4C9JH25 899 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 NDC80O14777 642 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CAPN9O14815 690 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PPEF2O14830 753 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 MAGEB2O15479 319 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 SUPT3HO75486 399 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 IL18RAPO95256 599 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 GGPS1O95749 300 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 GNA14O95837 355 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 ANXA2P07355 339 aaKnown RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 UBTFL6P0CB48 400 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 HARSP12081 509 aaKnown RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TPH1P17752 444 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CYP11B2P19099 503 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CALML3P27482 149 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CRABP2P29373 138 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CHRNA3P32297 505 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 UBA7P41226 1012 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 EPS15P42566 896 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 BCAT1P54687 386 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PLTPP55058 493 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 XIAPP98170 497 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CDR2Q01850 454 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 MED21Q13503 144 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 PRPF4BQ13523 1007 aaKnown RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 DCTN2Q13561 401 aaKnown RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 FHL1Q13642 323 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 RAPGEF1Q13905 1077 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 BTG3Q14201 252 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 RCN1Q15293 331 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 SLC45A4Q5BKX6 768 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 RNASE12Q5GAN4 147 aaKnown RBP3.87□□□□□ -1.79
FOXN3-213ENST00000556916 FAM83BQ5T0W9 1011 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CERCAMQ5T4B2 595 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TBC1D9BQ66K14 1250 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 CENPPQ6IPU0 288 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 VSTM1Q6UX27 236 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TMTC3Q6ZXV5 915 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 COPS6Q7L5N1 327 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 SLFN11Q7Z7L1 901 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 TMEM110Q86TL2 294 aa3.87□□□□□ -1.79
FOXN3-213ENST00000556916 VPS36Q86VN1 386 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms