RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EIF2B5Q13144 721 aaKnown RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MMRN1Q13201 1228 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 CLN3Q13286 438 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 C1orf61Q13536 156 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 DPYSL3Q14195 570 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 NFATC4Q14934 902 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 SPA17Q15506 151 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 CDKN3Q16667 212 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 TXNRD3NBQ6F5E7 133 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 LIPIQ6XZB0 460 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 KDM7AQ6ZMT4 941 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 DPPA4Q7L190 304 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 BZW1Q7L1Q6 419 aaKnown RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 OR56A4Q8NGH8 313 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 IFI44Q8TCB0 444 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 RFFLQ8WZ73 363 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 TSACCQ96A04 125 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-222ENST00000556768 SCRN2Q96FV2 425 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 WDR92Q96MX6 357 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MGME1Q9BQP7 344 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 C12orf49Q9H741 205 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GOLGA6AQ9NYA3 693 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 GULP1Q9UBP9 304 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 KLF15Q9UIH9 416 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 MOSPD1Q9UJG1 213 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 DNPEPQ9ULA0 475 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 KNTC1P50748 2209 aa7.34□□□□□ -1.23
SCFD1-222ENST00000556768 LRRD1A4D1F6 860 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 EME2A4GXA9 379 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 A6NHS1 94 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PSMD11O00231 422 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 TNFRSF10CO14798 259 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 MUSKO15146 869 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 HTRA2O43464 458 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 MFAP3LO75121 409 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PRKCGP05129 697 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 HOXC4P09017 264 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 CD48P09326 243 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 VIPR1P32241 457 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 ACTN2P35609 894 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 TNNT3P45378 269 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 NOP2P46087 812 aaKnown RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 MAXP61244 160 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 GALNT2Q10471 571 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 BIRC2Q13490 618 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PAFAH1B3Q15102 231 aaKnown RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PNCKQ6P2M8 343 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 TAF8Q7Z7C8 310 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 TP53INP2Q8IXH6 220 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 DCBLD1Q8N8Z6 715 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PCDH19Q8TAB3 1148 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 FAM71BQ8TC56 605 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 VOPP1Q96AW1 172 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 NUS1Q96E22 293 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 TSGA13Q96PP4 275 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 SEMA3CQ99985 751 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 LRRC61Q9BV99 259 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 ADGRE3Q9BY15 652 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PHPT1Q9NRX4 125 aaPredicted RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 RBM22Q9NW64 420 aaKnown RBP eCLIP7.34□□□□□ -1.242e-7■■■■□ 25.7
SCFD1-222ENST00000556768 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 DDX56Q9NY93 547 aaKnown RBP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 B4GALT6Q9UBX8 382 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 INTUQ9ULD6 942 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 PADI4Q9UM07 663 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 RAXQ9Y2V3 346 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.34□□□□□ -1.24
SCFD1-222ENST00000556768 HEY1Q9Y5J3 304 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 RAI2Q9Y5P3 530 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 DGKBQ9Y6T7 804 aa7.34□□□□□ -1.24
SCFD1-222ENST00000556768 ADAMTS9Q9P2N4 1935 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ITPR1Q14643 2758 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PPP1R12AO14974 1030 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-222ENST00000556768 SPOPO43791 374 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 GCATO75600 419 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 TCEA3O75764 348 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PGLSO95336 258 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 RPLP1P05386 114 aaKnown RBP7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PYGLP06737 847 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 CR2P20023 1033 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 KDELR1P24390 212 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 TRIM23P36406 574 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 RTP5Q14D33 572 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 PDK1Q15118 436 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ASTE1Q2TB18 679 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ATP13A4Q4VNC1 1196 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 LRRC38Q5VT99 294 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 NCBP2-AS2Q69YL0 99 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC70Q6NSX1 233 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 EFL1Q7Z2Z2 1120 aaKnown RBP7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ZSWIM9Q86XI8 627 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 MARCH9Q86YJ5 346 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 RHOT1Q8IXI2 618 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 RBFAQ8N0V3 343 aa7.33□□□□□ -1.24
SCFD1-222ENST00000556768 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms