RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 IGDCC3Q8IVU1 814 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 TMEFF1Q8IYR6 380 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 PDIK1LQ8N165 341 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 OR13C4Q8NGS5 318 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 UBXN4Q92575 508 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 BIRC7Q96CA5 298 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 ZNF778Q96MU6 729 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 WDR83Q9BRX9 315 aaKnown RBP17.39■□□□□ 0.37
TUBB3-211ENST00000556536 TRIM56Q9BRZ2 755 aaKnown RBP17.39■□□□□ 0.37
TUBB3-211ENST00000556536 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-211ENST00000556536 EBF2Q9HAK2 575 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 CHRAC1Q9NRG0 131 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 IL17CQ9P0M4 197 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 TCAF1Q9Y4C2 921 aa17.39■□□□□ 0.37
TUBB3-211ENST00000556536 HEATR9A2RTY3 570 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 C2orf81A6NN90 581 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 METTL12A8MUP2 240 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 PSMD11O00231 422 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 LATO43561 262 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 TM7SF2O76062 418 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 CRTAMO95727 393 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 PAK4O96013 591 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 LPOP22079 712 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 HMGCLP35914 325 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 SPINT3P49223 89 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 ZNF140P52738 457 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 TMPRSS15P98073 1019 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 CREB5Q02930 508 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 DNAJC21Q5F1R6 531 aaKnown RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 HP1BP3Q5SSJ5 553 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 ZC3H14Q6PJT7 736 aaKnown RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 PPHLN1Q8NEY8 458 aaKnown RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 CADM4Q8NFZ8 388 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 OR4K2Q8NGD2 314 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 SLC17A9Q9BYT1 436 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 SLC2A6Q9UGQ3 507 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 CD84Q9UIB8 345 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 NFU1Q9UMS0 254 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-211ENST00000556536 PCDHGA2Q9Y5H1 932 aa17.38■□□□□ 0.37
TUBB3-211ENST00000556536 E7ESA3 106 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 CCL22O00626 93 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 WNT9AO14904 365 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 RAD51BO15315 384 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 STX7O15400 261 aaKnown RBP17.37■□□□□ 0.37
TUBB3-211ENST00000556536 SLC31A1O15431 190 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 LILRB5O75023 590 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 BPIP17213 487 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 PDIA2Q13087 525 aaKnown RBP17.37■□□□□ 0.37
TUBB3-211ENST00000556536 SGCGQ13326 291 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 CUL1Q13616 776 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 FASTKD3Q14CZ7 662 aaKnown RBP17.37■□□□□ 0.37
TUBB3-211ENST00000556536 TSTD2Q5T7W7 516 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 CASC4Q6P4E1 433 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 CES3Q6UWW8 571 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 GPR26Q8NDV2 337 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 SCAMP4Q969E2 229 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 DTD2Q96FN9 168 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 DNAJC1Q96KC8 554 aaKnown RBP17.37■□□□□ 0.37
TUBB3-211ENST00000556536 HSPA12BQ96MM6 686 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 ORAI3Q9BRQ5 295 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 KIFC1Q9BW19 673 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 PCED1AQ9H1Q7 454 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 DUSP15Q9H1R2 295 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-211ENST00000556536 ABCG8Q9H221 673 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 FZD3Q9NPG1 666 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 PKD2L2Q9NZM6 624 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 SOX13Q9UN79 622 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 MAD1L1Q9Y6D9 718 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 R4GN57 208 aa17.37■□□□□ 0.37
TUBB3-211ENST00000556536 NMBRP28336 390 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 CNR2P34972 360 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ELK3P41970 407 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 PTGER3P43115 390 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 CBLBQ13191 982 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 AGERQ15109 404 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 PLK5Q496M5 336 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ALS2CLQ60I27 953 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ESRP1Q6NXG1 681 aaKnown RBP17.36■□□□□ 0.37
TUBB3-211ENST00000556536 KDM7AQ6ZMT4 941 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 CENPUQ71F23 418 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 CEP68Q76N32 757 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ARMCX6Q7L4S7 300 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 LPCAT2Q7L5N7 544 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 CCDC25Q86WR0 208 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ANKMY2Q8IV38 441 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 GSPT2Q8IYD1 628 aaKnown RBP17.36■□□□□ 0.37
TUBB3-211ENST00000556536 PELI3Q8N2H9 469 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 OR13J1Q8NGT2 312 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 ASB12Q8WXK4 309 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 SNX19Q92543 992 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 NUS1Q96E22 293 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 STAMBPL1Q96FJ0 436 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 KLF6Q99612 283 aaPredicted RBP17.36■□□□□ 0.37
TUBB3-211ENST00000556536 MYOCQ99972 504 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 FAM129AQ9BZQ8 928 aa17.36■□□□□ 0.37
TUBB3-211ENST00000556536 SAYSD1Q9NPB0 183 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms