RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 DPP3Q9NY33 737 aa8.58□□□□□ -1.04
MARK3-210ENST00000556463 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
MARK3-210ENST00000556463 COL4A5P29400 1685 aa8.58□□□□□ -1.04
MARK3-210ENST00000556463 TTC24A2A3L6 582 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 CENPXA8MT69 81 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 KCNU1A8MYU2 1149 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 INO80B-WBP1J3KQ70 363 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PHGDHO43175 533 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 DYNC1LI2O43237 492 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 DLX3O60479 287 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SLC4A1P02730 911 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SLC35E2BP0CK96 405 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ALOX12P18054 663 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ARCN1P48444 511 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 POLD2P49005 469 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 MPP1Q00013 466 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 MERTKQ12866 999 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 MADCAM1Q13477 382 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 POLD3Q15054 466 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 ZIK1Q3SY52 487 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 LRRC8EQ6NSJ5 796 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 LEMD2Q8NC56 503 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 FAM110BQ8TC76 370 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 RNF34Q969K3 372 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 NRBF2Q96F24 287 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 P2RY11Q96G91 374 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ATXN7L3BQ96GX2 97 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 MAP6Q96JE9 813 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SLC45A3Q96JT2 553 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 C1orf50Q9BV19 199 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 LRRC40Q9H9A6 602 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 GPN2Q9H9Y4 310 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 ATPIF1Q9UII2 106 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TSPAN16Q9UKR8 245 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 MAGED2Q9UNF1 606 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 IFT52Q9Y366 437 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TK2O00142 265 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SNX2O60749 519 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 EPHX2P34913 555 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TMBIM6P55061 237 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 DGKZQ13574 1117 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 OXA1LQ15070 435 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 FAM182BQ5T319 152 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 IER5Q5VY09 327 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 RAP1GAP2Q684P5 730 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 REP15Q6BDI9 236 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TTC23LQ6PF05 361 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 FRA10AC1Q70Z53 315 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TMEM192Q8IY95 271 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ZNF567Q8N184 647 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 C7orf31Q8N865 590 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PAPD5Q8NDF8 572 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 LGMNQ99538 433 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 CTRCQ99895 268 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 RAD21L1Q9H4I0 556 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 CAB39LQ9H9S4 337 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 IL1RL2Q9HB29 575 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 HMG20AQ9NP66 347 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SPAG4Q9NPE6 437 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TLR9Q9NR96 1032 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 RNF146Q9NTX7 359 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ZMAT5Q9UDW3 170 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 ZNF214Q9UL59 606 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 POLHQ9Y253 713 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 NME7Q9Y5B8 376 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 DOCK1Q14185 1865 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 HEATR9A2RTY3 570 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ACKR2O00590 384 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 TBX1O43435 398 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SEC14L2O76054 403 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 RASAL1O95294 804 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PRKCBP05771 671 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ABCB1P08183 1280 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 NFICP08651 508 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ATP4BP51164 291 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SESN2P58004 480 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 FPGSQ05932 587 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 PAFAH1B3Q15102 231 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 CDO1Q16878 200 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 OR6B2Q6IFH4 312 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ZC3HC1Q86WB0 502 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 PCDH20Q8N6Y1 951 aaKnown RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 ST13P5Q8NFI4 369 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 ADI1Q9BV57 179 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 NANOGQ9H9S0 305 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 CXXC1Q9P0U4 656 aaPredicted RBP8.57□□□□□ -1.04
MARK3-210ENST00000556463 FZD10Q9ULW2 581 aa8.57□□□□□ -1.04
MARK3-210ENST00000556463 ANKRD12Q6UB98 2062 aa8.56□□□□□ -1.04
MARK3-210ENST00000556463 AQP12BA6NM10 295 aa8.56□□□□□ -1.04
MARK3-210ENST00000556463 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
MARK3-210ENST00000556463 RNF103O00237 685 aa8.56□□□□□ -1.04
MARK3-210ENST00000556463 NUPL2O15504 423 aaKnown RBP8.56□□□□□ -1.04
MARK3-210ENST00000556463 GRAP2O75791 330 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms