RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 UNC13CQ8NB66 2214 aa22.58■■□□□ 1.2
ACTN1-220ENST00000556433 BPTFQ12830 3046 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 FUCA1P04066 466 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 PDHA1P08559 390 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 KRT10P13645 584 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 CCNB1P14635 433 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 CCKBRP32239 447 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 GJC1P36383 396 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 ARSEP51690 589 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 CDK3Q00526 305 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 TAF1BQ53T94 588 aaPredicted RBP22.57■■□□□ 1.2
ACTN1-220ENST00000556433 RAET1GQ6H3X3 334 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 ZNF564Q8TBZ8 553 aaPredicted RBP22.57■■□□□ 1.2
ACTN1-220ENST00000556433 KIAA1524Q8TCG1 905 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 GSDMCQ9BYG8 508 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.57■■□□□ 1.2
ACTN1-220ENST00000556433 IFNKQ9P0W0 207 aa22.57■■□□□ 1.2
ACTN1-220ENST00000556433 A0A0U1RQS6 177 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 NUDT21O43809 227 aaKnown RBP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 MFSD11O43934 449 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 C1QL1O75973 258 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 GYPCP04921 128 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 HGFP14210 728 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 GARSP41250 739 aaKnown RBP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 GNPDA1P46926 289 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 RHDQ02161 417 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 GALNT2Q10471 571 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 ILF3Q12906 894 aaKnown RBP eCLIP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 DPYSL3Q14195 570 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 PCSK4Q6UW60 755 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 SPRED1Q7Z699 444 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 TECPR1Q7Z6L1 1165 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 NRROSQ86YC3 692 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 CPNE8Q86YQ8 564 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 JAMLQ86YT9 394 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 KCTD6Q8NC69 237 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 FRMD8Q9BZ67 464 aaPredicted RBP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 POLR1EQ9GZS1 481 aaKnown RBP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 TRNAU1APQ9NX07 287 aaKnown RBP22.56■■□□□ 1.2
ACTN1-220ENST00000556433 CTTNBP2NLQ9P2B4 639 aa22.56■■□□□ 1.2
ACTN1-220ENST00000556433 ERVH48-1M5A8F1 160 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 FZD6O60353 706 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 FGF1P05230 155 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 TEAD1P28347 426 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 SLC5A2P31639 672 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 CASP14P31944 242 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 GPR1P46091 355 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 POLD2P49005 469 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 CLN3Q13286 438 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 PAFAH1B3Q15102 231 aaKnown RBP22.55■■□□□ 1.2
ACTN1-220ENST00000556433 ANKRD20A8PQ5CZ79 823 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 NCBP2-AS2Q69YL0 99 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 RFLNAQ6ZTI6 216 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 ZDHHC1Q8WTX9 485 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 SMIM14Q96QK8 99 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 ABCG8Q9H221 673 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 RBM22Q9NW64 420 aaKnown RBP eCLIP22.55■■□□□ 1.23e-6■■□□□ 13.2
ACTN1-220ENST00000556433 WDR70Q9NW82 654 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 TAAR2Q9P1P5 351 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 CD84Q9UIB8 345 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 SUFUQ9UMX1 484 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 PCDHGA7Q9Y5G6 932 aa22.55■■□□□ 1.2
ACTN1-220ENST00000556433 AGRPO00253 132 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 MATN3O15232 486 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 PROSCO94903 275 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 MAP3K6O95382 1288 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 JMJD7P0C870 316 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 AK4P27144 223 aaPredicted RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 EPHB1P54762 984 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 MAZP56270 477 aaKnown RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 B4GALNT1Q00973 533 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 ZFP36L1Q07352 338 aaKnown RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 DPTQ07507 201 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 PDK2Q15119 407 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 IFI16Q16666 785 aaKnown RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 ZSCAN23Q3MJ62 389 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 LRRC66Q68CR7 880 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 TIGD7Q6NT04 549 aaPredicted RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 MAP7D3Q8IWC1 876 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 PTCD2Q8WV60 388 aaKnown RBP22.54■■□□□ 1.2
ACTN1-220ENST00000556433 MAML1Q92585 1016 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 AP2M1Q96CW1 435 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 PISDQ9UG56 409 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 NENFQ9UMX5 172 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 SLC17A4Q9Y2C5 497 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 LOXL2Q9Y4K0 774 aa22.54■■□□□ 1.2
ACTN1-220ENST00000556433 ARHGEF17Q96PE2 2063 aaPredicted RBP22.53■■□□□ 1.2
ACTN1-220ENST00000556433 RHPN2P1A8MT19 583 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 B4GAT1O43505 415 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 CES1P23141 567 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 CCNCP24863 283 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 TAS2R40P59535 323 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 CTBSQ01459 385 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 DSC2Q02487 901 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 PTSQ03393 145 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 DOK6Q6PKX4 331 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 SLC30A9Q6PML9 568 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 CCDC81Q6ZN84 652 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 C17orf82Q86X59 251 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms