RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 BCL2L1Q07817 233 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 SQSTM1Q13501 440 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 SRLQ86TD4 932 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 PYROXD2Q8N2H3 581 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 ESX1Q8N693 406 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 CPT1CQ8TCG5 803 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 APMAPQ9HDC9 416 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 KLHL3Q9UH77 587 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 J3KR12 359 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 POLR1CO15160 346 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-219ENST00000556432 SEMA7AO75326 666 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 KATNA1O75449 491 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 DLSTP36957 453 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 MAPK9P45984 424 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 RGRP47804 291 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 POLD2P49005 469 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 AFMIDQ63HM1 303 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 ZNF787Q6DD87 383 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 STRADAQ7RTN6 431 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 SLFN11Q7Z7L1 901 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 PTCD2Q8WV60 388 aaKnown RBP13.9□□□□□ -0.18
ACTN1-219ENST00000556432 NCSTNQ92542 709 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 CINPQ9BW66 212 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-219ENST00000556432 FRMD8Q9BZ67 464 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-219ENST00000556432 ULBP3Q9BZM4 244 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 SPRY4Q9C004 299 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 CATSPERBQ9H7T0 1116 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 TLK1Q9UKI8 766 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 POLHQ9Y253 713 aa13.9□□□□□ -0.18
ACTN1-219ENST00000556432 TMEM184BQ9Y519 407 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-219ENST00000556432 CDC14CA4D256 554 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 INPP4BO15327 924 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 PALMO75781 387 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 MAP3K6O95382 1288 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 FUCA1P04066 466 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 MMEP08473 750 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 GM2AP17900 193 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 PTPN9P43378 593 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 HDAC4P56524 1084 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 NOMO3P69849 1222 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 CDK3Q00526 305 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 NFATC2Q13469 925 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 CRTC2Q53ET0 693 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-219ENST00000556432 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 SCYL2Q6P3W7 929 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
ACTN1-219ENST00000556432 JOSD2Q8TAC2 188 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 NTAN1Q96AB6 310 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 CELF6Q96J87 481 aaKnown RBP13.89□□□□□ -0.19
ACTN1-219ENST00000556432 OR2M4Q96R27 311 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 FBXO8Q9NRD0 319 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 B4GALT6Q9UBX8 382 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 SRPK3Q9UPE1 567 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 PLEKHM1Q9Y4G2 1056 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
ACTN1-219ENST00000556432 OAS3Q9Y6K5 1087 aaKnown RBP13.89□□□□□ -0.19
ACTN1-219ENST00000556432 ABCA12Q86UK0 2595 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 C2CD4BA6NLJ0 364 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 PRAMEF11O60813 436 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 DLGAP3O95886 979 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 RNF224P0DH78 156 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 FOXM1Q08050 763 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 WDR74Q6RFH5 385 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 MARK2Q7KZI7 788 aaKnown RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 ARHGAP22Q7Z5H3 698 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 UMODL1-AS1Q8N2C9 162 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 TSEN2Q8NCE0 465 aaKnown RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 SLC37A2Q8TED4 501 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 STAMBPL1Q96FJ0 436 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 COQ10AQ96MF6 247 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 C11orf70Q9BRQ4 267 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 TWSG1Q9GZX9 223 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 STN1Q9H668 368 aaKnown RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 PDFQ9HBH1 243 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-219ENST00000556432 PDP2Q9P2J9 529 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 ESPL1Q14674 2120 aa13.88□□□□□ -0.19
ACTN1-219ENST00000556432 LRBAP50851 2863 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
ACTN1-219ENST00000556432 IVLP07476 585 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 F8A1P23610 371 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 COL8A1P27658 744 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 ETV3P41162 512 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 CSNK1DP48730 415 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 SCNN1BP51168 640 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 PMS2P54278 862 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 CNGA3Q16281 694 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 C6orf15Q6UXA7 325 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-219ENST00000556432 TMEM135Q86UB9 458 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
ACTN1-219ENST00000556432 ECHDC3Q96DC8 303 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms