RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DNAJB4Q9UDY4 337 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ABT1Q9ULW3 272 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 NUMBLQ9Y6R0 609 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MIA3Q5JRA6 1907 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 F8W8V4 182 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 H0YJX3 145 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 M0QZQ0 153 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ARHGAP33O14559 1287 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 GPR182O15218 404 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FGF18O76093 207 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 USP1O94782 785 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 UBOX5O94941 541 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CYP11A1P05108 521 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ELNP15502 786 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CST5P28325 142 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CTNNB1P35222 781 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ADRA1BP35368 520 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ARL4AP40617 200 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MSH2P43246 934 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 GLUD2P49448 558 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PGFP49763 221 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FCGRTP55899 365 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 YWHAGP61981 247 aaKnown RBP eCLIP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PHC1P78364 1004 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 IL9RQ01113 521 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SLC18A2Q05940 514 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 OLIG2Q13516 323 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SPARCL1Q14515 664 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MBTPS1Q14703 1052 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PLEKHG4Q58EX7 1191 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DUS1LQ6P1R4 473 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TRAF7Q6Q0C0 670 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 NLRC3Q7RTR2 1065 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ECHDC2Q86YB7 292 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RNF135Q8IUD6 432 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 UNC5BQ8IZJ1 945 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DNAJC5GQ8N7S2 189 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 OR8K3Q8NH51 312 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SLC7A14Q8TBB6 771 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ZSCAN18Q8TBC5 510 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 AGAP11Q8TF27 550 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TFB1MQ8WVM0 346 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 NTAN1Q96AB6 310 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TUBGCP3Q96CW5 907 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DNAJC1Q96KC8 554 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PGLYRP2Q96PD5 576 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SLC9A7Q96T83 725 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MED10Q9BTT4 135 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FRMD8Q9BZ67 464 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PRDM12Q9H4Q4 367 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RUBCNLQ9H714 662 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 IARS2Q9NSE4 1012 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PAQR5Q9NXK6 330 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 EHD3Q9NZN3 535 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CDH9Q9ULB4 789 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 STAP1Q9ULZ2 295 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DNAJC16Q9Y2G8 782 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 COMMD3-BMI1R4GMX3 469 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FAM159BA6NKW6 160 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RNF103O00237 685 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 EDF1O60869 148 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SPAG6O75602 509 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 B3GAT3O94766 335 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ZWINTO95229 277 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 URODP06132 367 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ABCB1P08183 1280 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 POLR2CP19387 275 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CNTFP26441 200 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CRABP2P29373 138 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 NKX2-5P52952 324 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CRADDP78560 199 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 HPCAP84074 193 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SGCAQ16586 387 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PLA2G4EQ3MJ16 856 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 LRIT3Q3SXY7 679 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM259Q4ZIN3 620 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SGO1Q5FBB7 561 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 INTS6LQ5JSJ4 861 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MFSD14CQ5VZR4 134 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PM20D1Q6GTS8 502 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 C11orf88Q6PI97 169 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ABRAXAS1Q6UWZ7 409 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF567Q8N184 647 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ANKFN1Q8N957 763 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DNAAF3Q8N9W5 541 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 EDEM1Q92611 657 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 AKAP1Q92667 903 aaKnown RBP eCLIP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 HDAC11Q96DB2 347 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 LRRC39Q96DD0 335 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MTFMTQ96DP5 389 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SMARCD1Q96GM5 515 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF419Q96HQ0 510 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 EBNA1BP2Q99848 306 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 USB1Q9BQ65 265 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM55Q9BYV6 548 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM15Q9C019 465 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM245Q9H330 911 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RNF186Q9NXI6 227 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PHTF1Q9UMS5 762 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms