RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ANKRD22Q5VYY1 191 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 AP1ARQ63HQ0 302 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SCYL2Q6P3W7 929 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM154Q6P9G4 183 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ABHD17CQ6PCB6 329 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 C1orf228Q6PIY5 440 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 METTL7BQ6UX53 244 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ARCQ7LC44 396 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 NET1Q7Z628 596 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CLEC14AQ86T13 490 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 LRRC6Q86X45 466 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KIF18BQ86Y91 864 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ZDHHC17Q8IUH5 632 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 NUDCD3Q8IVD9 361 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ST13P4Q8IZP2 240 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ARHGAP18Q8N392 663 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SYNPOQ8N3V7 929 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 UBR7Q8N806 425 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 BANPQ8N9N5 519 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 RNF149Q8NC42 400 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 RFWD2Q8NHY2 731 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GSDMBQ8TAX9 411 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TEKT4Q8WW24 435 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SLC44A1Q8WWI5 657 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TIFAQ96CG3 184 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 OXNAD1Q96HP4 312 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM176AQ96HP8 235 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ZBTB45Q96K62 511 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 C7orf26Q96N11 449 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ACAP3Q96P50 834 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 OLFM3Q96PB7 478 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GBP5Q96PP8 586 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FAM111AQ96PZ2 611 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TRAPPC9Q96Q05 1148 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TBCBQ99426 244 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ACO2Q99798 780 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TCF25Q9BQ70 676 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CENPKQ9BS16 269 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF670Q9BS34 389 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CNPY3Q9BT09 278 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 YIPF3Q9GZM5 350 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PITHD1Q9GZP4 211 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TLE6Q9H808 572 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 XAB2Q9HCS7 855 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PNPLA8Q9NP80 782 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 POLR3BQ9NW08 1133 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 IL1RAPL1Q9NZN1 696 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SLC17A7Q9P2U7 560 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF212Q9UDV6 495 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 BCAP29Q9UHQ4 241 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TAGLN3Q9UI15 199 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CPSF3Q9UKF6 684 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ITGA11Q9UKX5 1188 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KIAA1257Q9ULG3 409 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SORCS3Q9UPU3 1222 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 HEY1Q9Y5J3 304 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 MAD1L1Q9Y6D9 718 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KMT2EQ8IZD2 1858 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 REV3LO60673 3130 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GOLGA8QA0A0J9YX86 632 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TCRBV9S1A1TA0A576 114 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TCRBV5S1A1TA0A578 114 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GOLGA8OA6NCC3 632 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 MAGEA13PA6NCF6 341 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KPNA7A9QM74 516 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 HACD1B0YJ81 288 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF487B1APH4 448 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 F8W8V4 182 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GOLGA8NF8WBI6 632 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ACKR2O00590 384 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CAPN9O14815 690 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 BIRC5O15392 142 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 XPOTO43592 962 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 AHCYL1O43865 530 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 MAGEC1O60732 1142 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 BANF1O75531 89 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 RFPL3O75679 317 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KLHL2O95198 593 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TRUB2O95900 331 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 APOEP02649 317 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ENO1P06733 434 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 APRTP07741 180 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CXCL8P10145 99 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TGFB3P10600 412 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 MYL2P10916 166 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PDGFRAP16234 1089 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GNAZP19086 355 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TPSB2P20231 275 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SERPINB3P29508 390 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 MIPP30301 263 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 FDFT1P37268 417 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TNFSF9P41273 254 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 OSTNP61366 133 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms