RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TRIM69Q86WT6 500 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PASD1Q8IV76 773 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MFN1Q8IWA4 741 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 RBM12BQ8IXT5 1001 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 STK40Q8N2I9 435 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 NXPE1Q8N323 547 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 UBR7Q8N806 425 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CLEC18CQ8NCF0 446 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PARD3BQ8TEW8 1205 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 RNF139Q8WU17 664 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 FAM131CQ96AQ9 280 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TTC1Q99614 292 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 DDX50Q9BQ39 737 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 SLC25A18Q9H1K4 315 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 IFT22Q9H7X7 185 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MCM8Q9UJA3 840 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 INTS6Q9UL03 887 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PCDHGA7Q9Y5G6 932 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 B3GALT1Q9Y5Z6 326 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CSNK1G3Q9Y6M4 447 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MYOFQ9NZM1 2061 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 OBSL1O75147 1896 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 GOLGA6L7A0A1B0GV03 622 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TYW5A2RUC4 315 aaKnown RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 EME2A4GXA9 379 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 PRAMEF25A6NGN4 478 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 FAM90A27PA6NNH2 459 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF891A8MT65 544 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 IKBKBO14920 756 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SLC31A1O15431 190 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ACSL4O60488 711 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 RTN2O75298 545 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TNFRSF1AP19438 455 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 GJB2P29033 226 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SDHAP31040 664 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SLC5A2P31639 672 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 DRD3P35462 400 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TKTL1P51854 596 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 HNRNPKP61978 463 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SULT2A1Q06520 285 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CCDC15Q0P6D6 951 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF177Q13360 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 MORC3Q14149 939 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TBR1Q16650 682 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CDKN3Q16667 212 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 KNOP1Q1ED39 458 aaKnown RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 POM121L1PQ3SYA9 428 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ZACNQ401N2 412 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 PITRM1Q5JRX3 1037 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 FAM26FQ5R3K3 315 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 BSPRYQ5W0U4 402 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CPZQ66K79 652 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 NUGGCQ68CJ6 796 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SPOPLQ6IQ16 392 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 RFWD3Q6PCD5 774 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TEPPQ6URK8 271 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CD300LDQ6UXZ3 194 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 EFL1Q7Z2Z2 1120 aaKnown RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 DSG4Q86SJ6 1040 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 NELFCDQ8IXH7 590 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 FBXO39Q8N4B4 442 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 AFAP1L2Q8N4X5 818 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TTC39CQ8N584 583 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 FAM26EQ8N5C1 309 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ANKRD52Q8NB46 1076 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 HJURPQ8NCD3 748 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 GOLGA5Q8TBA6 731 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 WFDC5Q8TCV5 224 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ADAMTS17Q8TE56 1095 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 DLG3Q92796 817 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ARRDC3Q96B67 414 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ZBTB8AQ96BR9 441 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CLIC6Q96NY7 704 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SPAG5Q96R06 1193 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 C1QTNF3Q9BXJ4 246 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 TNMDQ9H2S6 317 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ACSS2Q9NR19 701 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ABCC13Q9NSE7 274 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 SEPT10Q9P0V9 454 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 FBXO2Q9UK22 296 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CA5BQ9Y2D0 317 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CEP83Q9Y592 693 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms