RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FFAR2O15552 330 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 AQP9O43315 295 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 SIGLEC6O43699 453 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 HOXC4P09017 264 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TSHRP16473 764 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 SPINK2P20155 84 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 KELP23276 732 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TEAD1P28347 426 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TRIM23P36406 574 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 ETV3P41162 512 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 ACADVLP49748 655 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 BLKP51451 505 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 STC1P52823 247 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 PPARDQ03181 441 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 WASHC5Q12768 1159 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 XRCC4Q13426 336 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 NOMO1Q15155 1222 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 PTPRRQ15256 657 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 ALG11Q2TAA5 492 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 DENND2CQ68D51 928 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 CRTC1Q6UUV9 634 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 B4GALNT4Q76KP1 1039 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 ZC3H18Q86VM9 953 aaKnown RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 CHCHD4Q8N4Q1 142 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 RNF10Q8N5U6 811 aaKnown RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 FUBP1Q96AE4 644 aaKnown RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TADA1Q96BN2 335 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TEKT5Q96M29 485 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 RBM15Q96T37 977 aaKnown RBP eCLIP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 VAT1Q99536 393 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 HERPUD2Q9BSE4 406 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 LRRC61Q9BV99 259 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 DUSP23Q9BVJ7 150 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 ADGRE3Q9BY15 652 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 SLC13A1Q9BZW2 595 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 GLOD4Q9HC38 313 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 SPASTQ9UBP0 616 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 PNMA8BQ9ULN7 279 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-205ENST00000556310 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
SLIRP-205ENST00000556310 PLXNB3Q9ULL4 1909 aa11.52□□□□□ -0.56
SLIRP-205ENST00000556310 USP24Q9UPU5 2620 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 FAM221BA6H8Z2 402 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ANKRD66B4E2M5 251 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 K7ESM1 405 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 TPP1O14773 563 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 KRT86O43790 486 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 RFPL3O75679 317 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 RASGRP1O95267 797 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 FTCDO95954 541 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 C1SP09871 688 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 CDK4P11802 303 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 CKMT2P17540 419 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ACP1P24666 158 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 HK3P52790 923 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 DPTQ07507 201 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 DNAJC3Q13217 504 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ILKQ13418 452 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 QPCTQ16769 361 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 FAXCQ5TGI0 409 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ZCCHC8Q6NZY4 707 aaKnown RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 PNCKQ6P2M8 343 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ENPP7Q6UWV6 458 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 Q6ZVL8 140 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF765Q7L2R6 523 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 TECPR1Q7Z6L1 1165 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 PELI3Q8N2H9 469 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 FSTL5Q8N475 847 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 FAM181AQ8N9Y4 354 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 HTR3CQ8WXA8 447 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 PDXPQ96GD0 296 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 TCEAL2Q9H3H9 227 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 PHPT1Q9NRX4 125 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 KLHL8Q9P2G9 620 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-205ENST00000556310 KLK13Q9UKR3 277 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
SLIRP-205ENST00000556310 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 LMO7DNF2Z398 122 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 H7C0C1 242 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 TNFRSF10CO14798 259 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 TJP3O95049 919 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 MT-CYBP00156 380 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-205ENST00000556310 PYGLP06737 847 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 PYGMP11217 842 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 CKMT1AP12532 417 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 NFKB1P19838 968 aa11.51□□□□□ -0.57
SLIRP-205ENST00000556310 CD68P34810 354 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms