RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 KLF1Q13351 362 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-217ENST00000556203 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 CCDC157Q569K6 752 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 RAET1GQ6H3X3 334 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 KDELC1Q6UW63 502 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 HEATR4Q86WZ0 1026 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 HID1Q8IV36 788 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 OR4C6Q8NH72 309 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TSACCQ96A04 125 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-217ENST00000556203 AP2M1Q96CW1 435 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 LGR4Q9BXB1 951 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 ABCG8Q9H221 673 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 NLGN3Q9NZ94 848 aa15.17■□□□□ 0.02
ACTN1-217ENST00000556203 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 TMEM202A6NGA9 273 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 HYAL3O43820 417 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 STK10O94804 968 aaKnown RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 RASGRP1O95267 797 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 HOXC4P09017 264 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PIRTP0C851 137 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 ALPPL2P10696 532 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 SPINK2P20155 84 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 KELP23276 732 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 GPR1P46091 355 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 BLKP51451 505 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 HK3P52790 923 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 CDK3Q00526 305 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 DPTQ07507 201 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 C1orf61Q13536 156 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PROX2Q3B8N5 592 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PRRT3Q5FWE3 981 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 KCTD16Q68DU8 428 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 ITPRIPL1Q6GPH6 555 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 CCDC70Q6NSX1 233 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 LYSMD3Q7Z3D4 306 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 RD3Q7Z3Z2 195 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 CHCHD4Q8N4Q1 142 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 CCHCR1Q8TD31 782 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 OR1E3Q8WZA6 343 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 SCAMP4Q969E2 229 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PDXPQ96GD0 296 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 TBATAQ96M53 351 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 LRRC61Q9BV99 259 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 DUSP23Q9BVJ7 150 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 TEX101Q9BY14 249 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 GBA3Q9H227 469 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PHPT1Q9NRX4 125 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 ANGPTL2Q9UKU9 493 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 WASF3Q9UPY6 502 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 SHOC2Q9UQ13 582 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 CSNK1G3Q9Y6M4 447 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 TP53BP1Q12888 1972 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PCNX2A6NKB5 2137 aa15.16■□□□□ 0.02
ACTN1-217ENST00000556203 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 GCATO75600 419 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 SOD1P00441 154 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 SLC4A1P02730 911 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 TEAD1P28347 426 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 SHC2P98077 582 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 TCEA2Q15560 299 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 DEFB133Q30KQ1 61 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ANKRD20A3Q5VUR7 823 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF765Q7L2R6 523 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 RAB44Q7Z6P3 723 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 RAVER1Q8IY67 606 aaKnown RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 NRSN1Q8IZ57 195 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 IPMKQ8NFU5 416 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 CCDC110Q8TBZ0 833 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ADAMTS14Q8WXS8 1223 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 MRGPRX2Q96LB1 330 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 SPATA13Q96N96 652 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 RIOK2Q9BVS4 552 aaKnown RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ZFYVE1Q9HBF4 777 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 USP29Q9HBJ7 922 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 MAGEE1Q9HCI5 957 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 MRPL40Q9NQ50 206 aaKnown RBP15.15■□□□□ 0.02
ACTN1-217ENST00000556203 PKD2L2Q9NZM6 624 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 ZNF711Q9Y462 761 aa15.15■□□□□ 0.02
ACTN1-217ENST00000556203 NCOR2Q9Y618 2525 aa15.14■□□□□ 0.01
ACTN1-217ENST00000556203 LOC285095A0A1B0GVY8 99 aa15.14■□□□□ 0.01
ACTN1-217ENST00000556203 TNFRSF10CO14798 259 aa15.14■□□□□ 0.01
ACTN1-217ENST00000556203 ZNF189O75820 626 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-217ENST00000556203 DKK1O94907 266 aa15.14■□□□□ 0.01
ACTN1-217ENST00000556203 TNFP01375 233 aa15.14■□□□□ 0.01
ACTN1-217ENST00000556203 EPOP01588 193 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms