RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SPPL3Q8TCT6 385 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SREK1Q8WXA9 508 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 STON2Q8WXE9 905 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 BADQ92934 168 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 USP13Q92995 863 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TSPAN17Q96FV3 270 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 GCNAQ96QF7 691 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TCF12Q99081 682 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TCF25Q9BQ70 676 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TDRD1Q9BXT4 1180 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ADGRE3Q9BY15 652 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 FAM96AQ9H5X1 160 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TRPC7Q9HCX4 862 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 NPHS2Q9NP85 383 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 TXLNGQ9NUQ3 528 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SMPD4Q9NXE4 827 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 HACD3Q9P035 362 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 GGT7Q9UJ14 662 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SLC39A10Q9ULF5 831 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 ARHGAP26Q9UNA1 814 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 RPL26L1Q9UNX3 145 aaKnown RBP8.32□□□□□ -1.08
ATXN3-235ENST00000556082 SLC4A7Q9Y6M7 1214 aa8.32□□□□□ -1.08
ATXN3-235ENST00000556082 CHD5Q8TDI0 1954 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 FAM95CA0A1B0GW59 222 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 H0Y626 953 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 GOLGA8TH3BQL2 631 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CBX4O00257 560 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TRAFD1O14545 582 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TRIM13O60858 407 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 RPP40O75818 363 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 HAUS5O94927 633 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 UNC5CO95185 931 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 KLHL2O95198 593 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 WISP3O95389 354 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PRLP01236 227 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 HNRNPA1P09651 372 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SPATA31D3P0C874 917 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SLC35E2BP0CK96 405 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 IRF1P10914 325 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 RALBP11234 206 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TCF3P15923 654 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ALOX15P16050 662 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PTPN2P17706 415 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 OGNP20774 298 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MAPK8P45983 427 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SLC1A6P48664 564 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 LIG3P49916 1009 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CLCN4P51793 760 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 KPNA2P52292 529 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 HK2P52789 917 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TAS2R39P59534 338 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 AP1S1P61966 158 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MPP1Q00013 466 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ELOAQ14241 798 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 KRT72Q14CN4 511 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 FSCBQ5H9T9 825 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PPM1LQ5SGD2 360 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ZNF470Q6ECI4 717 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PDE12Q6L8Q7 609 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MRNIPQ6NTE8 343 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 RETSATQ6NUM9 610 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ZYG11AQ6WRX3 759 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SPATA31D4Q6ZUB0 917 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ASRGL1Q7L266 308 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 KDELC2Q7Z4H8 507 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SDCCAG8Q86SQ7 713 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 WFDC8Q8IUA0 241 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 C10orf107Q8IVU9 208 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PLD6Q8N2A8 252 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ACVR1CQ8NER5 493 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 RFWD2Q8NHY2 731 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 PPP1R14CQ8TAE6 165 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 HDAC10Q969S8 669 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 LMLNQ96KR4 655 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 TSNARE1Q96NA8 513 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 GPR78Q96P69 363 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 OMDQ99983 421 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MECRQ9BV79 373 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SLC46A2Q9BY10 475 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 MYLK2Q9H1R3 596 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CAB39LQ9H9S4 337 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 POPDC3Q9HBV1 291 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 ASAH2Q9NR71 780 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 NLE1Q9NVX2 485 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 OXSMQ9NWU1 459 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 KIAA1522Q9P206 1035 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-235ENST00000556082 CFAP97Q9P2B7 532 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 LHX3Q9UBR4 397 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 HAO1Q9UJM8 370 aa8.31□□□□□ -1.08
ATXN3-235ENST00000556082 SORCS3Q9UPU3 1222 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms