RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ELFN1P0C7U0 828 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 GZMAP12544 262 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 AMPD1P23109 780 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 IL1R2P27930 398 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 RBMS1P29558 406 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ARL4AP40617 200 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PRKCIP41743 596 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SSR1P43307 286 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 LSSP48449 732 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PEX5P50542 639 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 RENBPP51606 427 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SRP54P61011 504 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 POLR2LP62875 67 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CXADRP78310 365 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TLE3Q04726 772 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 IL10RBQ08334 325 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SLC10A7Q0GE19 358 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SPIDRQ14159 915 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF235Q14590 738 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 RFTN1Q14699 578 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 LBRQ14739 615 aaKnown RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 NFATC4Q14934 902 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 IQCB1Q15051 598 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ACOX1Q15067 660 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 BROXQ5VW32 411 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CYP4V2Q6ZWL3 525 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 GKN2Q86XP6 184 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ARHGAP12Q8IWW6 846 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TP53INP2Q8IXH6 220 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 FSTL5Q8N475 847 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 KYQ8NBH2 561 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ATL2Q8NHH9 583 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF578Q96N58 590 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 CCDC3Q9BQI4 270 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 EDEM3Q9BZQ6 932 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 GRIP2Q9C0E4 1043 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 TSPAN10Q9H1Z9 355 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 PRORYQ9H606 182 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SUDS3Q9H7L9 328 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 THSD1Q9NS62 852 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.72□□□□□ -1.33
PSEN1-216ENST00000556066 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 GPR34Q9UPC5 381 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 ENTPD2Q9Y5L3 495 aa6.72□□□□□ -1.33
PSEN1-216ENST00000556066 COL6A6A6NMZ7 2263 aa6.71□□□□□ -1.33
PSEN1-216ENST00000556066 SPTAN1Q13813 2472 aaKnown RBP6.71□□□□□ -1.33
PSEN1-216ENST00000556066 PMS2P1A4D2B8 440 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 GOLGA6CA6NDK9 693 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 GOLGA6BA6NDN3 693 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 TMEM202A6NGA9 273 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 KLK10O43240 276 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 RECKO95980 971 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 GOLGA6DP0CG33 693 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 MYBL1P10243 752 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 PLA2G2AP14555 144 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 TCF4P15884 667 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 MSNP26038 577 aaKnown RBP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 CSNK1DP48730 415 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 HCAR3P49019 387 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ZNF135P52742 658 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ERVPABLB-1P60509 514 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 AP1S1P61966 158 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 TPM4P67936 248 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 RALGDSQ12967 914 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 MTM1Q13496 603 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 DPYSQ14117 519 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 KRT81Q14533 505 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 NR1I3Q14994 352 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 AFMIDQ63HM1 303 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 KCTD16Q68DU8 428 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 LVRNQ6Q4G3 990 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 TMCO3Q6UWJ1 677 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 LIPIQ6XZB0 460 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 DPPA4Q7L190 304 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 GPR155Q7Z3F1 870 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 TAF8Q7Z7C8 310 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ATPAF2Q8N5M1 289 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 LZTR1Q8N653 840 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ARL10Q8N8L6 244 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 Q8N9G6 341 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 SPC24Q8NBT2 197 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 OR56A4Q8NGH8 313 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 NSMCE1Q8WV22 266 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 KCNE4Q8WWG9 221 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 OR1E3Q8WZA6 343 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 FUBP1Q96AE4 644 aaKnown RBP6.71□□□□□ -1.34
PSEN1-216ENST00000556066 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 ECHDC3Q96DC8 303 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 PDXPQ96GD0 296 aa6.71□□□□□ -1.34
PSEN1-216ENST00000556066 HIC2Q96JB3 615 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms