RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FADS3Q9Y5Q0 445 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 A0A0U1RQS6 177 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PSMD11O00231 422 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PCDH8O95206 1070 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 APBB3O95704 486 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 IVLP07476 585 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 DCNP07585 359 aaKnown RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 NUDT17P0C025 328 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 LHCGRP22888 699 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PSMA3P25788 255 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 LIG3P49916 1009 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 STC1P52823 247 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PTPN5P54829 565 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 EIF3BP55884 814 aaKnown RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PTSQ03393 145 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 MGAT5Q09328 741 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 RALGDSQ12967 914 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 MTAPQ13126 283 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 THOC5Q13769 683 aaKnown RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PTPRCAPQ14761 206 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 STAT4Q14765 748 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 ACOX1Q15067 660 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 UBAP2Q5T6F2 1119 aaKnown RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 AFTPHQ6ULP2 937 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 KCNMB4Q86W47 210 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 CBARPQ8N350 705 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 OTUD6BQ8N6M0 293 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 OR14C36Q8NHC7 312 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 CALML6Q8TD86 181 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 CDKN2AIPNLQ96HQ2 116 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 HHIPQ96QV1 700 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 RUFY1Q96T51 708 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 FAM167BQ9BTA0 163 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 WRAP53Q9BUR4 548 aaKnown RBP11.02□□□□□ -0.65
TMEM260-208ENST00000555905 FUT8Q9BYC5 575 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 ACSS3Q9H6R3 686 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PLAC1Q9HBJ0 212 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 MOCS1Q9NZB8 636 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 SERGEFQ9UGK8 458 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 APPL1Q9UKG1 709 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 PLAAQ9Y263 795 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 ITM2BQ9Y287 266 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 SCN8AQ9UQD0 1980 aa11.02□□□□□ -0.65
TMEM260-208ENST00000555905 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 TMEM221A6NGB7 291 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 M0R296 226 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CCL22O00626 93 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 SPINT1O43278 529 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 PLRG1O43660 514 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 LZTS3O60299 673 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 C1SP09871 688 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 ERVK-10P10266 1014 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 BPIP17213 487 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 SPAM1P38567 509 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CXCL12P48061 93 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 ARCN1P48444 511 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 SPINT3P49223 89 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 TPMTP51580 245 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CCR3P51677 355 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 ARSDP51689 593 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 NAB1Q13506 487 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 HSP90AA5PQ58FG0 334 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 NEPROQ6NW34 567 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 TRMT10BQ6PF06 316 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 LRIG3Q6UXM1 1119 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 LIPIQ6XZB0 460 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CTAGE3PQ8IX95 158 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 RAVER1Q8IY67 606 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 NRSN1Q8IZ57 195 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 UNC5BQ8IZJ1 945 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CAMKK1Q8N5S9 505 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 OR4L1Q8NH43 312 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 FAM131CQ96AQ9 280 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 EID2BQ96D98 161 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 TBATAQ96M53 351 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 CDH19Q9H159 772 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 SUDS3Q9H7L9 328 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 VIPAS39Q9H9C1 493 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 PPCSQ9HAB8 311 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 PREBQ9HCU5 417 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 NSMCE4AQ9NXX6 385 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 ZFATQ9P243 1243 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 FKBPLQ9UIM3 349 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 GGT7Q9UJ14 662 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 FNDC3AQ9Y2H6 1198 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 IKBKGQ9Y6K9 419 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 SLC30A1Q9Y6M5 507 aa11.01□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF106Q9H2Y7 1883 aaKnown RBP11.01□□□□□ -0.65
TMEM260-208ENST00000555905 GLYATL1P3A0A0U1RQE8 302 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 FAM159BA6NKW6 160 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
TMEM260-208ENST00000555905 GOLGA8KD6RF30 607 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms