RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ARNT2Q9HBZ2 717 aa11.78□□□□□ -0.52
MTHFD1-211ENST00000555709 XAB2Q9HCS7 855 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-211ENST00000555709 SUN2Q9UH99 717 aa11.78□□□□□ -0.52
MTHFD1-211ENST00000555709 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
MTHFD1-211ENST00000555709 PCDHGC4Q9Y5F7 938 aa11.78□□□□□ -0.52
MTHFD1-211ENST00000555709 COL5A1P20908 1838 aaPredicted RBP11.77□□□□□ -0.52
MTHFD1-211ENST00000555709 TEX51A0A1B0GUA7 166 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 E7ESA3 106 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 PPFIA2O75334 1257 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 LEFTY1O75610 366 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 NDST3O95803 873 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 AGTP01019 485 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 FGF1P05230 155 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 UGT2B4P06133 528 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 TUBBP07437 444 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 SYPP08247 313 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 PDHA1P08559 390 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 HOXB2P14652 356 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 HLA-DPA1P20036 260 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 CA4P22748 312 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 MCM3P25205 808 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 EIF2S3P41091 472 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 RPL26P61254 145 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 RAD51Q06609 339 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 BCL2L1Q07817 233 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 SLC1A5Q15758 541 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 HIF1AQ16665 826 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 SIRPB2Q5JXA9 342 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 LRRC8BQ6P9F7 803 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 GDPD4Q6W3E5 623 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 PPP1R21Q6ZMI0 780 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 RABEPKQ7Z6M1 372 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 AGGF1Q8N302 714 aaeCLIP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 OR52K1Q8NGK4 314 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 BAHD1Q8TBE0 780 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 FMO2Q99518 471 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 WDR83Q9BRX9 315 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 OSBPL1AQ9BXW6 950 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 FOXP3Q9BZS1 431 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 RSPH9Q9H1X1 276 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 FBRSQ9HAH7 460 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 PPM1HQ9ULR3 514 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 RPL26L1Q9UNX3 145 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 CHKBQ9Y259 395 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 SCN8AQ9UQD0 1980 aa11.77□□□□□ -0.53
MTHFD1-211ENST00000555709 UBR5O95071 2799 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 AVILO75366 819 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 WISP1O95388 367 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 CPP00450 1065 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 PRNPP04156 253 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 GRIA4P48058 902 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 COPAP53621 1224 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 CDH17Q12864 832 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 MTM1Q13496 603 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 GALNT3Q14435 633 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 STARD3Q14849 445 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 EOGTQ5NDL2 527 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 FNBP1LQ5T0N5 605 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 ARMC12Q5T9G4 340 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 DSG4Q86SJ6 1040 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 FAM181AQ8N9Y4 354 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 LPCAT1Q8NF37 534 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 OR2T3Q8NH03 318 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 PIH1D2Q8WWB5 315 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 SUV39H2Q9H5I1 410 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 PIH1D1Q9NWS0 290 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 DKK3Q9UBP4 350 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 MTRF1LQ9UGC7 380 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 SARDHQ9UL12 918 aa11.76□□□□□ -0.53
MTHFD1-211ENST00000555709 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 A0A1W2PQ67 120 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 FAM149AA5PLN7 773 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 TLX3O43711 291 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 SYNCRIPO60506 623 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 BANF1O75531 89 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 UQCRHP07919 91 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 ITGB7P26010 798 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 PSMD8P48556 350 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 METAP1P53582 386 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 ARL4CP56559 192 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 QPCTQ16769 361 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 ZNF805Q5CZA5 627 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 SDE2Q6IQ49 451 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 PARS2Q7L3T8 475 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 GPR155Q7Z3F1 870 aa11.75□□□□□ -0.53
MTHFD1-211ENST00000555709 KDELC2Q7Z4H8 507 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms