RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ABL2P42684 1182 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 C1QTNF8P60827 252 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 TBL3Q12788 808 aaKnown RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 UNC50Q53HI1 259 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 HERC6Q8IVU3 1022 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 LPGAT1Q92604 370 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 IL21Q9HBE4 155 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 TMEM39AQ9NV64 488 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 COPG1Q9Y678 874 aaKnown RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 H0Y626 953 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 AIM2O14862 343 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 KIF1CO43896 1103 aaKnown RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 ZNF678Q5SXM1 525 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 LRRC74BQ6ZQY2 392 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 HPS6Q86YV9 775 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 TCEAL8Q8IYN2 117 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 EXT2Q93063 718 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 NAF1Q96HR8 494 aaKnown RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 OR51B4Q9Y5P0 310 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 GBF1Q92538 1859 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 LTBP2Q14767 1821 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 UBA6A0AVT1 1052 aaPredicted RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 TRPC5OSA6NMA1 111 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 ANKRD66B4E2M5 251 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 SNUPNO95149 360 aaKnown RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 URODP06132 367 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 ITGB8P26012 769 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 FMO4P31512 558 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 VHLP40337 213 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 PPP3CCP48454 512 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 PIANPQ8IYJ0 282 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 BHMTQ93088 406 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 L3HYPDHQ96EM0 354 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 DDX50Q9BQ39 737 aaKnown RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 FEM1AQ9BSK4 669 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 INTS10Q9NVR2 710 aaKnown RBP24.25■■□□□ 1.47
TMEM260-207ENST00000555497 SPG21Q9NZD8 308 aa24.25■■□□□ 1.47
TMEM260-207ENST00000555497 GFRA2O00451 464 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 EPHB3P54753 998 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 NCEH1Q6PIU2 408 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 AFTPHQ6ULP2 937 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 DDX53Q86TM3 631 aaKnown RBP24.24■■□□□ 1.47
TMEM260-207ENST00000555497 EFHBQ8N7U6 833 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 RP9Q8TA86 221 aaKnown RBP24.24■■□□□ 1.47
TMEM260-207ENST00000555497 N4BP2L2Q92802 583 aaPredicted RBP24.24■■□□□ 1.47
TMEM260-207ENST00000555497 CCDC124Q96CT7 223 aaKnown RBP24.24■■□□□ 1.47
TMEM260-207ENST00000555497 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 ANKRD27Q96NW4 1050 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 ZBTB26Q9HCK0 441 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 GALPQ9UBC7 116 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 IKZF3Q9UKT9 509 aa24.24■■□□□ 1.47
TMEM260-207ENST00000555497 CCDC189A1A4V9 331 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 LRRC14BA6NHZ5 514 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 MTHFD2P13995 350 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 ANPEPP15144 967 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 CES1P23141 567 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 CCNIQ14094 377 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PELI3Q8N2H9 469 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 TTC16Q8NEE8 873 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 POPDC3Q9HBV1 291 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 EML4Q9HC35 981 aaKnown RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 BPIFA1Q9NP55 256 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 FKBPLQ9UIM3 349 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PPM1HQ9ULR3 514 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 FAM50BQ9Y247 325 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 FCF1Q9Y324 198 aaKnown RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 C2orf81A6NN90 581 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 NVLO15381 856 aaKnown RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 TEX28O15482 410 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 SUPT7LO94864 414 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 MT-CO1P00395 513 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 HOXB8P17481 243 aaPredicted RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 LPOP22079 712 aaPredicted RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 NUDT2P50583 147 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PDAP1Q13442 181 aaKnown RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 CYLC2Q14093 348 aaPredicted RBP24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PSAPL1Q6NUJ1 521 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PAQR3Q6TCH7 311 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 Q6ZNB5 142 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 ALG14Q96F25 216 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 MEAF6Q9HAF1 191 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 PACSIN3Q9UKS6 424 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 CPQQ9Y646 472 aa24.23■■□□□ 1.47
TMEM260-207ENST00000555497 UBXN8O00124 270 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 SLC22A2O15244 555 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 BMP1P13497 986 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 CSKP41240 450 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 NFKB2Q00653 900 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 GALNT1Q10472 559 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-207ENST00000555497 PPP1R3AQ16821 1122 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 TCHHL1Q5QJ38 904 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-207ENST00000555497 ATXN7L2Q5T6C5 722 aaPredicted RBP24.22■■□□□ 1.47
TMEM260-207ENST00000555497 CLEC6AQ6EIG7 209 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 CYHR1Q6ZMK1 362 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 FBXW8Q8N3Y1 598 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 TTC30BQ8N4P2 665 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 CEP70Q8NHQ1 597 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 DNAJC9Q8WXX5 260 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 RCN3Q96D15 328 aa24.22■■□□□ 1.47
TMEM260-207ENST00000555497 VPS51Q9UID3 782 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms