RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 ASPMQ8IZT6 3477 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 IGF2RP11717 2491 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 FAM221BA6H8Z2 402 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 ANKRD66B4E2M5 251 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 H3BM21 787 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 APOC4-APOC2K7ER74 178 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 PSMD11O00231 422 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 YY2O15391 372 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 PMPCBO75439 489 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 APOC2P02655 101 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 CKMT2P17540 419 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 RBL1P28749 1068 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 RPL26P61254 145 aaKnown RBP13.65□□□□□ -0.22
SNX6-203ENST00000555416 CCZ1BP86790 482 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
SNX6-203ENST00000555416 KDELC1Q6UW63 502 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 TMPRSS7Q7RTY8 843 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 SFTPA2Q8IWL1 248 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 LRRC8AQ8IWT6 810 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 OR56A4Q8NGH8 313 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 HTR3CQ8WXA8 447 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 LYSMD1Q96S90 227 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 TEX101Q9BY14 249 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 SLC13A1Q9BZW2 595 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 WDR26Q9H7D7 661 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 SPASTQ9UBP0 616 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 KLQ9UEF7 1012 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 RPL26L1Q9UNX3 145 aaKnown RBP13.65□□□□□ -0.22
SNX6-203ENST00000555416 EFR3BQ9Y2G0 817 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 CSNK1G3Q9Y6M4 447 aa13.65□□□□□ -0.22
SNX6-203ENST00000555416 EPG5Q9HCE0 2579 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 C1orf232A0A0U1RR37 186 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 GOLGA6CA6NDK9 693 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 GOLGA6BA6NDN3 693 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 GOLGA6L6A8MZA4 724 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 HACD1B0YJ81 288 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 LMO7DNF2Z398 122 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 H7C0C1 242 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 RFPL3O75679 317 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 RASGRP1O95267 797 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 HOXC4P09017 264 aaPredicted RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 GOLGA6DP0CG33 693 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 CA4P22748 312 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 ACP1P24666 158 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 ATP5OP48047 213 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 POLD2P49005 469 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 CDK3Q00526 305 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 CDK18Q07002 472 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 SMAD1Q15797 465 aaKnown RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 CCNI2Q6ZMN8 369 aaPredicted RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 BZW1Q7L1Q6 419 aaKnown RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 TRIM74Q86UV6 250 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 CCL4L1Q8NHW4 92 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 BTN2A2Q8WVV5 523 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 HES6Q96HZ4 224 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 RIOK2Q9BVS4 552 aaKnown RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 HAUS2Q9NVX0 235 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 GOLGA6AQ9NYA3 693 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
SNX6-203ENST00000555416 PCDHGA1Q9Y5H4 931 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 SPO11Q9Y5K1 396 aa13.64□□□□□ -0.23
SNX6-203ENST00000555416 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 ASXL3Q9C0F0 2248 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 NEMP2A6NFY4 417 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 CACNB4O00305 520 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 AURKAO14965 403 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 ARHGAP6O43182 974 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 CEACAM5P06731 702 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 MYCLP1P12525 358 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 CKMT1AP12532 417 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 ZNF30P17039 623 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 HTR1BP28222 390 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 CHRNA4P43681 627 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 WNT3AP56704 352 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 EIF3EP60228 445 aaKnown RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 DAB2P98082 770 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 DPTQ07507 201 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 XRCC4Q13426 336 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 SLC14A2Q15849 920 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 RAET1GQ6H3X3 334 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 GUSBP11Q6P575 273 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 UNQ6494/PRO21346Q6UXR6 183 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 PID1Q7Z2X4 250 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 SLC35F3Q8IY50 421 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 NDUFAF2Q8N183 169 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 FAM181AQ8N9Y4 354 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 AP2M1Q96CW1 435 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 MRGPRX2Q96LB1 330 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 TBATAQ96M53 351 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 ADGRE3Q9BY15 652 aa13.63□□□□□ -0.23
SNX6-203ENST00000555416 FRMD8Q9BZ67 464 aaPredicted RBP13.63□□□□□ -0.23
SNX6-203ENST00000555416 TMEM168Q9H0V1 697 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms