RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 GLRX5Q86SX6 157 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 NRSN1Q8IZ57 195 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 PLA2G15Q8NCC3 412 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 OR4C6Q8NH72 309 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 LMX1AQ8TE12 382 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 SCG3Q8WXD2 468 aaKnown RBP12.09□□□□□ -0.47
SRP54-206ENST00000555317 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 UCKL1Q9NWZ5 548 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 NLGN3Q9NZ94 848 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 CD84Q9UIB8 345 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 MOSPD1Q9UJG1 213 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
SRP54-206ENST00000555317 SCAMP1O15126 338 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ANXA9O76027 345 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 CLDN7O95471 211 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 TNFP01375 233 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ANXA6P08133 673 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 HOXC4P09017 264 aaPredicted RBP12.08□□□□□ -0.48
SRP54-206ENST00000555317 MYCLP1P12525 358 aaPredicted RBP12.08□□□□□ -0.48
SRP54-206ENST00000555317 STC1P52823 247 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 GEMP55040 296 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 WNT3AP56704 352 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 SRP54P61011 504 aaKnown RBP12.08□□□□□ -0.48
SRP54-206ENST00000555317 MPP3Q13368 585 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 IHHQ14623 411 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 PTPRRQ15256 657 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ELOCQ15369 112 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 FAM182AQ5T1J6 154 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 MEI1Q5TIA1 1274 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ZNF765Q7L2R6 523 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 HEATR4Q86WZ0 1026 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 RBFAQ8N0V3 343 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 FSTL5Q8N475 847 aaPredicted RBP12.08□□□□□ -0.48
SRP54-206ENST00000555317 IPMKQ8NFU5 416 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 OR56A4Q8NGH8 313 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 GLMNQ92990 594 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 FUBP1Q96AE4 644 aaKnown RBP12.08□□□□□ -0.48
SRP54-206ENST00000555317 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 FCRL5Q96RD9 977 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 LYSMD1Q96S90 227 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 GPR63Q9BZJ6 419 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 GBA3Q9H227 469 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 C10orf88Q9H8K7 445 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 ZFYVE1Q9HBF4 777 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 RAD18Q9NS91 495 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 NCKIPSDQ9NZQ3 722 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 KNTC1P50748 2209 aa12.08□□□□□ -0.48
SRP54-206ENST00000555317 A0A0U1RQS6 177 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 RGSL1A5PLK6 1076 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 K7ESM1 405 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 C1SP09871 688 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 ATXN1LP0C7T5 689 aaKnown RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 PIRTP0C851 137 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 CDK4P11802 303 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 GM2AP17900 193 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 TEAD1P28347 426 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 PMLP29590 882 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 TRIM23P36406 574 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 DUSP3P51452 185 aaPredicted RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 HK3P52790 923 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 PTSQ03393 145 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 DPTQ07507 201 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 ALG11Q2TAA5 492 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 ANKRD20A2Q5SQ80 823 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 ANKRD20A1Q5TYW2 823 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 ANKRD20A3Q5VUR7 823 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 LYSMD3Q7Z3D4 306 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 TECPR1Q7Z6L1 1165 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 RAVER1Q8IY67 606 aaKnown RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 TSACCQ96A04 125 aaPredicted RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 TBATAQ96M53 351 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 SPATA13Q96N96 652 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 TRIB3Q96RU7 358 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 LRRC61Q9BV99 259 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 FRMD8P1Q9BZ68 369 aaPredicted RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 CARD9Q9H257 536 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 MAGEE1Q9HCI5 957 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 KLF15Q9UIH9 416 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 AAR2Q9Y312 384 aaKnown RBP12.07□□□□□ -0.48
SRP54-206ENST00000555317 ZNF711Q9Y462 761 aa12.07□□□□□ -0.48
SRP54-206ENST00000555317 LRP4O75096 1905 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 LMO7DNF2Z398 122 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 TRIM38O00635 465 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 RFPL3O75679 317 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 EPOP01588 193 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 FGF1P05230 155 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CKMT2P17540 419 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms