RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DUPD1Q68J44 220 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DENND5AQ6IQ26 1287 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 AKT1S1Q96B36 256 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 LINGO1Q96FE5 620 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 E7ENQ6 273 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ITGA2P17301 1181 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ATP5C1P36542 298 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 EFR3AQ14156 821 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZBTB6Q15916 424 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ERICH5Q6P6B1 374 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 KCT2Q8NC54 265 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SETD7Q8WTS6 366 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 OR52E6Q96RD3 313 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PLEKHF1Q96S99 279 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MED31Q9Y3C7 131 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ADGRL2O95490 1459 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TNS3Q68CZ2 1445 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C5orf51A6NDU8 294 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZSCAN5CA6NGD5 496 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 A8MUA0 341 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GYPCP04921 128 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 HGFP14210 728 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 AHCYP23526 432 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DDX6P26196 483 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ARMCX6Q7L4S7 300 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TMPRSS9Q7Z410 1059 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C7orf61Q8IZ16 206 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DEFB106AQ8N104 65 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MAB21L3Q8N8X9 362 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SLC43A3Q8NBI5 491 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TCP10LQ8TDR4 215 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZSCAN5AQ9BUG6 496 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 B3GNT4Q9C0J1 378 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PABPC3Q9H361 631 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF226Q9NYT6 803 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RPTORQ8N122 1335 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GSC2O15499 205 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ITGB1P05556 798 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MAGP20916 626 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PTPN4P29074 926 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RPL3P39023 403 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 S100A10P60903 97 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RPL19P84098 196 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SLC13A2Q13183 592 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C17orf64Q86WR6 236 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TAS1R2Q8TE23 839 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CKAP2Q8WWK9 683 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZHX1-C8orf76Q96EF9 292 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GTPBP2Q9BX10 602 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C3orf14Q9HBI5 128 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SNRNP200O75643 2136 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RECQL4O94761 1208 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CAMTA2O94983 1202 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 LDOC1O95751 146 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ADSSP30520 456 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TTPAP49638 278 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NDUFA9Q16795 377 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 STXBP5Q5T5C0 1151 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RAD9BQ6WBX8 426 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RASGRP3Q8IV61 690 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 HTATIP2Q9BUP3 242 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MANSC4A6NHS7 340 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PEX11AO75192 247 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CASRP41180 1078 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 IRAK1P51617 712 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 QSOX2Q6ZRP7 698 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF627Q7L945 461 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GALNT13Q8IUC8 556 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SNX33Q8WV41 574 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TCEAL3Q969E4 200 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SENP8Q96LD8 212 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TOR3AQ9H497 397 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM27Q9HBJ8 222 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NUP50Q9UKX7 468 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ADM5C9JUS6 153 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TLX3O43711 291 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NRP2O60462 931 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 KERAO60938 352 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NELFEP18615 380 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TUBG1P23258 451 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DRG2P55039 364 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 STOX1Q6ZVD7 989 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 FOXRED2Q8IWF2 684 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C1orf216Q8TAB5 229 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C11orf24Q96F05 449 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CFAP97Q9P2B7 532 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 AFDNP55196 1824 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 BACE1P56817 501 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 MRPS6P82932 125 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PPATQ06203 517 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM63BQ5T3F8 832 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ATXN7L2Q5T6C5 722 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 UNC5BQ8IZJ1 945 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 UBE2J2Q8N2K1 259 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms