RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SKIDA1Q1XH10 827 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 WDR45BQ5MNZ6 344 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 ZDHHC24Q6UX98 284 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 DNASE2BQ8WZ79 361 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 UBXN4Q92575 508 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 EID2BQ96D98 161 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 PLEKHG4BQ96PX9 1271 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 KIFC1Q9BW19 673 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 ZDHHC18Q9NUE0 388 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 SAMD15Q9P1V8 674 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 MTRF1LQ9UGC7 380 aaKnown RBP16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 ARL5AQ9Y689 179 aa16.42■□□□□ 0.22
SPTLC2-203ENST00000554901 E7ESA3 106 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 AVILO75366 819 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 PYGLP06737 847 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 GM2AP17900 193 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 HNRNPA2B1P22626 353 aaKnown RBP16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 AKT2P31751 481 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 ZNF140P52738 457 aaPredicted RBP16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 SEPT6Q14141 434 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 SIM2Q14190 667 aaPredicted RBP16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 Q6ZVL8 140 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 CENPUQ71F23 418 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 FAM174AQ8TBP5 190 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 NUS1Q96E22 293 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 SIGLEC10Q96LC7 697 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 NLE1Q9NVX2 485 aaPredicted RBP16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 SYBUQ9NX95 663 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 SOX13Q9UN79 622 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 TRPM6Q9BX84 2022 aa16.41■□□□□ 0.22
SPTLC2-203ENST00000554901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 FAM237BA0A1B0GVD1 139 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 MEI4A8MW99 385 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 PRAMEF26H0Y7S4 382 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 H7C0S8 307 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 PAK4O96013 591 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TEAD1P28347 426 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 MAT2AP31153 395 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 ETV3P41162 512 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 ACVR1Q04771 509 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 SRSF5Q13243 272 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 FGL2Q14314 439 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 LRRC14Q15048 493 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TRADDQ15628 312 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 FNBP1LQ5T0N5 605 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TSTD2Q5T7W7 516 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 SLC41A1Q8IVJ1 513 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TMEFF1Q8IYR6 380 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 PRSS33Q8NF86 280 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 CENPTQ96BT3 561 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 EPC1Q9H2F5 836 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 FAM83DQ9H4H8 585 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 APPL1Q9UKG1 709 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 A0A0U1RQS6 177 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TOR1BO14657 336 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TTC4O95801 387 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TUBBP07437 444 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 BPIP17213 487 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TNFRSF8P28908 595 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 HOXD12P35452 270 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TCF15Q12870 199 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 HLTFQ14527 1009 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 BBS9Q3SYG4 887 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 LYSMD4Q5XG99 296 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 PDPK2PQ6A1A2 396 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 ESRP1Q6NXG1 681 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 CASC4Q6P4E1 433 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 OR4K2Q8NGD2 314 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 IFT81Q8WYA0 676 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 STAMBPL1Q96FJ0 436 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 LOXL4Q96JB6 756 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 KLF6Q99612 283 aaPredicted RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 EBNA1BP2Q99848 306 aaKnown RBP16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 ORAI3Q9BRQ5 295 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 SEMA4AQ9H3S1 761 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 CHRAC1Q9NRG0 131 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 COQ6Q9Y2Z9 468 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 HS3ST3A1Q9Y663 406 aa16.4■□□□□ 0.22
SPTLC2-203ENST00000554901 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 SLC31A1O15431 190 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 SLC4A1P02730 911 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 SPAM1P38567 509 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 CARSP49589 748 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 CRADDP78560 199 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 DHX9Q08211 1270 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 MTM1Q13496 603 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 WSCD2Q2TBF2 565 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 MSS51Q4VC12 460 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 HENMT1Q5T8I9 393 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 TMEM135Q86UB9 458 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 GPR161Q8N6U8 529 aaKnown RBP16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 TMEM145Q8NBT3 493 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 AP2M1Q96CW1 435 aa16.39■□□□□ 0.21
SPTLC2-203ENST00000554901 SGSM3Q96HU1 749 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms