RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 FAPQ12884 760 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 CCDC40Q4G0X9 1142 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 FBXO43Q4G163 708 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 HECTD2Q5U5R9 776 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 EGFLAMQ63HQ2 1017 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ZNF529Q6P280 563 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 RHBDF2Q6PJF5 856 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 WDR5BQ86VZ2 330 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 LONP2Q86WA8 852 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ARHGEF19Q8IW93 802 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 DCLK2Q8N568 766 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 CNTD1Q8N815 330 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ANKRD52Q8NB46 1076 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 OR56A1Q8NGH5 318 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 OR2I1PQ8NGU4 316 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 RPLP0P6Q8NHW5 317 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 NDRG1Q92597 394 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 HOXB13Q92826 284 aaPredicted RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 CNOT6LQ96LI5 555 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 NT5C1BQ96P26 610 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 MYOCQ99972 504 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 UBXN6Q9BZV1 441 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 INTS2Q9H0H0 1204 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 CLSTN2Q9H4D0 955 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 SERHL2Q9H4I8 314 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TLR8Q9NR97 1041 aaKnown RBP4.33□□□□□ -1.72
VTI1B-203ENST00000554636 MOCS1Q9NZB8 636 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 RWDD2AQ9UIY3 292 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 MCM8Q9UJA3 840 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 TSPAN16Q9UKR8 245 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 PRKAB1Q9Y478 270 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 GPR45Q9Y5Y3 372 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 FRYLO94915 3013 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 CACNA1AO00555 2505 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 ABCA7Q8IZY2 2146 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 RALGAPA1Q6GYQ0 2036 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 PLXND1Q9Y4D7 1925 aa4.33□□□□□ -1.72
VTI1B-203ENST00000554636 SPTBN2O15020 2390 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 GON4LQ3T8J9 2241 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 PJA2O43164 708 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TULP3O75386 442 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 KAT7O95251 611 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 GNA14O95837 355 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 CALCAP01258 141 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 AFPP02771 609 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 KLKB1P03952 638 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 PAEPP09466 180 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SETSIPP0DME0 302 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 VDRP11473 427 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 CD19P15391 556 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SLC6A9P48067 706 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 RPL34P49207 117 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 MTNR1BP49286 362 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TKTL1P51854 596 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 YWHAGP61981 247 aaKnown RBP eCLIP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 YWHAEP62258 255 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 GCNT1Q02742 428 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 GAD2Q05329 585 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 KDSRQ06136 332 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 ADIGQ0VDE8 80 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 BST2Q10589 180 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SP140Q13342 867 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 KLF1Q13351 362 aaPredicted RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 DMC1Q14565 340 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 ACAP2Q15057 778 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 CAMK4Q16566 473 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 LPAL2Q16609 132 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 C10orf120Q5SQS8 335 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 METRNLQ641Q3 311 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 PM20D1Q6GTS8 502 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 PGM2L1Q6PCE3 622 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM270Q6UE05 265 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 LCLAT1Q6UWP7 414 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 CLEC17AQ6ZS10 378 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SYT13Q7L8C5 426 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM25Q86YD3 366 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SCML4Q8N228 414 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 UBA3Q8TBC4 463 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 NRG4Q8WWG1 115 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TFAP2BQ92481 460 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 RUBCNQ92622 972 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SECISBP2LQ93073 1101 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 EXOC4Q96A65 974 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 OTUB2Q96DC9 234 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 RNF31Q96EP0 1072 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 ULBP1Q9BZM6 244 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 DNAI2Q9GZS0 605 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 NACA2Q9H009 215 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 SPHK2Q9NRA0 654 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM140Q9NV12 185 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 FBXO34Q9NWN3 711 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 CLIC5Q9NZA1 410 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 TBC1D14Q9P2M4 693 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 RASAL2Q9UJF2 1139 aa4.32□□□□□ -1.72
VTI1B-203ENST00000554636 LSM7Q9UK45 103 aaKnown RBP4.32□□□□□ -1.72
VTI1B-203ENST00000554636 INTUQ9ULD6 942 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms